Method for reducing ammonium and lactate production in cho cells
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[0051]Metabolic Network Reconstruction
[0052]A draft network reconstruction of the glycolytic and amino acid catabolic pathways in CHO cells was generated using the mouse metabolic pathways as template. Biochemical pathway data from mouse metabolism was retrieved from the Kyoto Encyclopedia of Genes and Genomes database (Kanehisa and Goto, 2000; Kanehisa et al., 2014) and homologous gene sequences in the CHO genome were identified using the Chinese hamster genome database www.CHOgenome.org (Hammond et al., 2012). The draft network reconstruction was further refined by careful curation of gene-protein-reaction relationships using manual genome annotation and literature evidence. The finalized reconstruction featured 319 proteins catalyzing 183 reactions with 188 metabolites.
[0053]Single-Guide RNA Target Design and Transfection
[0054]Design and selection of single-guide RNA (sgRNA) target sites was performed with the online tool “CRISPy” (Ronda et al., 2014). The sgRNA expression vector...
example 2
Knock Out OF HPD in a IgG-Producing Cell Line
[0064]Single-Guide RNA Target Design and Transfection
[0065]Design and selection of single-guide RNA (sgRNA) target sites was performed with the online tool “CRISPy” (Ronda et al., 2014). The sgRNA expression vectors were constructed as previously described (Ronda et al., 2014). Prior to transfection, CHO-S suspension cells obtained from Life Technologies, transformed to express an IgG and selected for high specific productivities, were grown in CD-CHO medium supplemented with 8 mM L-glutamine (Gibco) and 0.5% anti-clumping reagent (Gibco) in a humidified shaking incubator operated at 37° C., 5% CO2 and 120 rpm. One day prior to transfection, cells were washed and seeded in medium without anti-clumping reagent at 5×105 cells / mL. Cells were transfected with expression vectors encoding GFP_2A-Cas9 (Gray et al., 2015) and sgRNA targeting Gad2 to generate single-gene knock out transfectants. For controls, “mock” cell lines were generated trans...
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