Shrimp health system visual rapid detection kit based on LAMP technology
A detection kit and shrimp technology, applied in the development of aquatic pathogen detection reagents, can solve the problems of high detection cost for users, unsuitable for promotion and use by grassroots farmers, and inability to visualize display, etc., and achieve the effect of simple operation
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Embodiment 1
[0047] The gene sequence of 18S ribosomal RNA of shrimp, crab, fish and ginseng was used for multiple alignment with the 18S ribosomal RNA gene sequence of Litopenaeus vannamei shown in SEQ ID No: 1; When there are too many alignment sequences, sequences with highly conserved regions cannot be obtained; therefore, after screening, Macrobrachium rosenbergii18S (GQ131934), Penaeus indicus 18S (MH400902), Penaeus semisulcatus 18S (DQ079766), Procambarus clarkii 18S (AF436001), Scylla Multiple alignment of paramamosain 18S (KC902763) with the sequence shown in SEQ ID No: 1; the highly conserved region of the sequence shown in SEQ ID No: 1 was obtained by screening; PrimerExplorer V4 software was used to design the internal reference quality control LAMP primer set according to the conserved region; The invention designs a total of four sets of primers, which are respectively recorded as NCZK-1, NCZK-2, NCZK-3, and NCZK-4, and each set of primers respectively includes two inner prim...
Embodiment 2 4
[0052] Example 2 Amplification analysis of four sets of internal reference quality control primer sets
[0053] Template preparation: Extraction of Crayfish, Australian freshwater lobster, blue crab, large yellow croaker, double-spotted pufferfish, oblique grouper, gentian grouper, vannamei prawn, rough sea cucumber, flower sea cucumber, The genomic DNA of 11 species such as Apostichopus japonicus was used for the amplification analysis of four sets of primer sets of NCZK-1, NCZK-2, NCZK-3 and NCZK-4.
[0054] 1. The NCZK-1, NCZK-2, NCZK-3, and NCZK-4 primer combinations are respectively based on the genomic DNA of Crayfish, Australian freshwater lobster, blue crab, large yellow croaker, and Penaeus vannamei as templates, and Using water as a negative control, the LAMP reaction was performed at 63° C. for 60 minutes. After the reaction, the amplification results were analyzed by observing the amplification curve.
[0055] The LAMP reaction system (25 μL) is:
[0056]
[0...
Embodiment 3
[0088] Shrimp health system visualization rapid detection kit based on LAMP technology, including: internal reference quality control primer set and IHHNV virus primer set, white spot syndrome virus primer set, hepatic enterococcus primer set, shrimp iridescent virus primer set, shrimp acute hepatopancreas At least one of the Necroptosis-V. parahaemolyticus primer sets; also contains reaction buffer, Bst DNA polymerase, dNTPs, ddH 2 O (RNase-free) and a chromogenic dye; wherein, the chromogenic dye is any one of calcein, HNB, and phenol red reagent.
[0089] Described internal reference quality control primer set is any group in NCZK-1, NCZK-2, NCZK-3, NCZK-4 described in embodiment 1;
[0090] The IHHNV virus primer set is a group in IHHNV-1, IHHNV-2:
[0091]
[0092]
[0093] The white spot syndrome virus primer set is any one of WSSV-1, WSSV-2, WSSV-3:
[0094]
[0095] The EHP primer set is any one of EHP-1, EHP-2, EHP-3:
[0096]
[0097] The shrimp iridov...
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