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Reaction solution capable of improving specificity, primer pair, probe and kit for detecting canine parainfluenza

A detection kit and technology for canine parainfluenza virus, applied in the field of molecular biology, can solve the problems of poor specificity of reverse transcription reaction RT-PCR non-specific amplification, poor specificity of nucleic acid detection reagents for canine parainfluenza virus detection reagents, etc. Achieve the effects of improving specificity, realizing specific detection, and improving the efficiency of reverse transcription reaction

Pending Publication Date: 2019-10-01
东莞博盛生物科技有限公司 +1
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0007] The object of the present invention is to provide a kind of reaction solution, primer pair, probe and test kit for the detection of canine parainfluenza that improve the specificity of reverse transcription nucleic acid chain amplification reaction, thereby solve the poor specificity of reverse transcription reaction in the prior art , RT-PCR non-specific amplification is obvious; canine parainfluenza virus detection reagents - including the problem of poor specificity of nucleic acid detection reagents

Method used

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  • Reaction solution capable of improving specificity, primer pair, probe and kit for detecting canine parainfluenza
  • Reaction solution capable of improving specificity, primer pair, probe and kit for detecting canine parainfluenza
  • Reaction solution capable of improving specificity, primer pair, probe and kit for detecting canine parainfluenza

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0027] Preparation of reaction solution for reverse transcription reaction and reverse transcription reaction:

[0028] In this embodiment, a conventional reaction solution and a reaction solution of the present invention are configured, and the reverse transcription reaction is performed using the MS2 bacteriophage conserved region (SEQ ID No: 4) as a template, and a set of primer pairs for the reverse transcription reaction is designed to be 100% identical in sequence Primers (SEQ ID No:5 / SEQ ID No:6), another set of primers with one base mismatch (SEQ ID No:7 / SEQ ID No:8).

[0029] The reverse transcription reaction uses the SMART MMLV reverse transcriptase system of Bao Biological Company. One group prepared the reaction solution according to the kit instructions, and the other group prepared the reaction solution according to the kit instructions and added recA protein (concentration: 0.01%) and ATP (concentration 100ng / L), the primers were entrusted to Guangzhou Aiji Bio...

Embodiment 2

[0046] Reaction solution preparation and PCR amplification for PCR reaction:

[0047] In this embodiment, the cDNA in Example 1 is used as a template for PCR, and the reagents are TaKaRaEx from Treasure Biological Company. PCR kit, the reaction solution was prepared according to the kit instructions, and the primers were entrusted to Guangzhou Aiji Biosynthesis.

[0048] Forward primer (SEQ ID No:9): tgaaggcgta cactgcc

[0049] Reverse primer (SEQ ID No: 10): aagcatctca tatgcaccct

[0050] Table 2

[0051]

[0052] Electrophoresis results such as figure 2 shown.

[0053] After three verifications, no non-specific amplification was found in the group after adding recA protein and ATP, which confirmed that the use of recA protein and ATP can improve the specificity of RT-PCR.

Embodiment 3

[0055] Primer pair, probe and preparation method for detecting canine parainfluenza virus

[0056] In this example, primer pairs were designed for the conserved region of canine parainfluenza virus.

[0057] After downloading canine parainfluenza genome data from different countries and regions from NCBI, DNAMAN was used for comparative analysis, and primer pairs and probes were designed for the conserved regions of canine parainfluenza genes. The sequences of primer pairs and probes are as follows:

[0058] Forward primer (SEQ ID No: 1): 5'G (amino group) TCCTAATGCAGGCATG 3';

[0059] Reverse primer (SEQ ID No:2): 5'C (amino group) AGGTTGGTCTGGCG 3'

[0060] Fluorescent probe (SEQ ID No: 3): 5'FAM-ATAGT (amino group) GACTTGCAAGTGCATGACT-BHQ13'.

[0061] In this embodiment, the preparation of primers includes: designing primers for the conserved region of canine parainfluenza virus such as primers shown in SEQ ID No: 1, SEQ ID No: 2, and using an amino group to base the 5' e...

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Abstract

The invention discloses a reaction solution capable of improving specificity of an inverse transcription nucleic acid chain type amplification reaction, primer pair, probe and kit for detecting canineparainfluenza. A method for improving the specificity of the inverse transcription nucleic acid chain type amplification reaction comprises the steps that in an inverse transcription reaction stage,recA protein and ATP are utilized for ensuring and improving the specificity of an inverse transcription product; compared with the prior art, the specificity of the inverse transcription product is significantly improved, and the non-specific amplification phenomenon does not occur on the inverse transcription product obtained by adopting the method in a later PCR reaction; the kit for detectingthe canine parainfluenza virus adopts primers and the probe which are modified by amino groups, the specificity is improved, the detection time is shortened, the diagnosis capacity is ensured to the greatest extent, and convenience is provided for clinical use.

Description

technical field [0001] The invention relates to the technical field of molecular biology, in particular to a reaction solution for detecting canine parainfluenza, a primer pair, a probe and a kit for improving the specificity and sensitivity of reverse transcription nucleic acid chain amplification reaction. Background technique [0002] Reverse transcription PCR (RT-PCR) is a widely used variant of the polymerase chain reaction (PCR). In RT-PCR, an RNA strand is reverse transcribed into complementary DNA, which is then used as a template for DNA amplification by PCR. Exponential amplification by RT-PCR is a very sensitive technique that can detect very low copy number RNA. RT-PCR is widely used in the detection of RNA viruses, the diagnosis of genetic diseases, and can be used to quantitatively monitor the content of a certain RNA. [0003] The key step of RT-PCR is the reverse transcription of RNA. There are two commonly used reverse transcriptases, namely avian myelobla...

Claims

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Application Information

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IPC IPC(8): C12Q1/70C12Q1/686C12N15/11
CPCC12Q1/701C12Q1/686C12Q2521/107C12Q2563/107C12Q2522/101C12Q2525/117
Inventor 金京勋刘昕王弋邹欣欧海航
Owner 东莞博盛生物科技有限公司
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