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Method of extracting low-abundance viral nucleic acid

A viral nucleic acid and low-abundance technology, applied in the biological field, can solve problems such as processing interference, false negative test results, and reducing the yield and yield of low-abundance nucleic acid sequences, so as to reduce false negatives and increase nucleic acid yield and yield Effect

Inactive Publication Date: 2014-10-01
SHANGHAI ENSURE BIOLOGICALS
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  • Summary
  • Abstract
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AI Technical Summary

Problems solved by technology

[0007] Since the surface of ordinary nano magnetic beads is coated with a layer of silicate material, all nucleic acids can be adsorbed during the nucleic acid extraction and purification process, and a mixture of various nucleic acids is obtained after elution, which will affect the subsequent PCR amplification and other Interference caused by sample processing may also reduce the yield and yield of some low-abundance nucleic acid sequences. For clinical tests that require high sensitivity, it will cause false negative test results

Method used

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Examples

Experimental program
Comparison scheme
Effect test

Embodiment Construction

[0018] The present invention will be further described below in conjunction with examples.

[0019] 1) Purchase nano magnetic beads containing streptavidin.

[0020] 2) Synthesis of HBV virus specific nucleic acid sequence

[0021] 5’-[biotion]TGCTGCTGCCTCATCCTTGTC-3’

[0022] 3) Use a pipette to add 0.9ml mixed blood sample and 0.9ml lysate into a 2ml centrifuge tube, mix with a shaker, add 10ul HBV specific nucleic acid sequence, heat at 75°C for 10 minutes, and cool at room temperature for 10 minutes.

[0023] 4) Add 20ul of the magnetic bead solution and mix at room temperature for 10 minutes, so that the biotin in the sample is fully combined with the streptavidin on the magnetic beads.

[0024] 5) Wash the magnetic beads with 700ul wash buffer for the first time.

[0025] 6) Use 20-50ul elution buffer to elute the HBV virus nucleic acid bound on the magnetic beads.

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Abstract

A method of extracting low-abundance viral nucleic acid is disclosed. The method includes steps of: adding a lysis liquid into blood to release viral nucleic acid into the solution; adding a biotin-labeled specific nucleic acid fragment capable of hybridization with the viral nucleic acid; adding streptavidin-labeled nanometer magnetic beads, wherein streptavidin on surfaces of the magnetic beads can be combined with biotin to form a magnetic bead-streptavidin-biotin-specific nucleic acid fragment-viral nucleic acid composite; and washing the magnetic beads with a washing liquid to remove the viral nucleic acid from the magnetic beads. By adoption of the method, the extraction efficiency and the yield of nucleic acid in low-titer viral samples can be increased so as to reduce false negative detection results due to the low extraction efficiency. The method is particularly suitable for clinic blood screening, and other applications.

Description

Technical field [0001] The invention belongs to the field of biotechnology, and specifically relates to the use of nano magnetic beads to extract low-abundance viral nucleic acids from blood, including single-stranded and double-stranded DNA and RNA. Background technique [0002] Nucleic acid extraction and purification technology is a basic technology of biochemistry and molecular biology. As molecular biology technology is widely used in biology, medicine and related fields, nucleic acid extraction and purification technology has also been further developed. [0003] Nucleic acids are combined with various proteins in cells. The extraction of nucleic acid mainly refers to the separation of nucleic acid from protein, polysaccharide, fat and other biological macromolecular substances. Most nucleic acid extraction steps generally include cell lysis, removal of nucleic acid-bound proteins, polysaccharides, lipids and other biological components, removal of other unwanted nucleic ac...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/10
Inventor 黄泓
Owner SHANGHAI ENSURE BIOLOGICALS
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