Application of compound in preparation of drug used for resisting Schistosomiasis japonicum
A technology for schistosomiasis and compounds, applied in the field of medicine, can solve problems such as no public reports yet
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Embodiment 1
[0030] Example 1. Homology modeling of the tertiary structure of SjOAR protein
[0031] The homology modeling of the tertiary structure of the SjOAR protein was completed using the template-based structure prediction server HHpred, followed by Modeller for model construction. The template with the highest homology is an enone reductase (PDB ID: 1IY8) from Corynebacterium aquaticus M-13, which belongs to the short-chain dehydrogenase family, and its structure binds NADH and inhibitor 2 -Presented in the form of a methyl-2,4-pentanediol complex, the conserved region for NADH binding and the conserved site for inhibitor binding provide an ideal binding region for molecular docking (see figure 1 ). The predicted structure of SjOAR shows that the protein is composed of 6 α-helices and 6 β-sheets, presenting an α / β "sandwich" structure as a whole, with α-helices on both sides and β-sheets in the middle, parallel to each other. A typical Rossmann-fold structure is formed. The pre...
Embodiment 2
[0032] Example 2. Virtual Screening
[0033] Candidate molecules: 14,400 small molecule compounds included in Maybridge HitFinder.
[0034] Screening principles: Follow the Lipinski principle, that is, the compound has no more than 5 hydrogen bond donors, no more than 10 hydrogen bond acceptors, a molecular weight of no more than 500Da, and a logP value of n-octanol-water partition coefficient less than 5.
[0035] Screening method: 14,400 small molecules were scored by docking with SjOAR protein using the Sybyl v8.0 Surflex docking program (www.tripos.com), and the compounds whose scoring function was in the top 5% were identified, and the software AutoDock4 was used again .2 Perform docking scoring verification (http: / / autodock.scripps.edu / ). Finally, the small molecules whose scoring function was in the top 27 were determined for the in vitro insecticidal activity test (Table 1 below). figure 2 It is the molecular docking result of compound OAR27 and SjOAR protein.
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Embodiment 3
[0038] Example 3. In vitro screening of active compounds against Schistosoma japonicum
[0039] 1. Experimental materials and methods
[0040] 1. Parasites
[0041] The cercariae of Schistosoma japonicum (Anhui strain) were provided by China CDC Center for Parasitic Disease Prevention and Control.
[0042] 2. Host
[0043] Kunming rats, weighing between 18-22 g, were purchased from Shanghai Experimental Animal Center, Chinese Academy of Sciences.
[0044] 3. Inoculation of animals and collection of worms
[0045] Vaccination: by the method of abdominal infection. The mice were fixed on a wooden board with rubber bands, and then their abdominal hair was shaved off with an elevator, and each mouse was infected with 80-100 cercariae.
[0046] Harvesting worms: Mice infected with cercariae for 35 days were sacrificed by cutting the carotid artery and exsanguinating blood, and then perfusing the thoracic artery with ice-cold normal saline supplemented with sodium heparin to co...
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