One-stop PCR (Polymerase Chain Reaction) method
A stand-alone, dye mixture technology, applied in the field of molecular biology, can solve the problems of endangering the health of experimenters, insufficient PCR amplification efficiency, and consuming a lot of time and energy, and achieves easy preparation, improved efficiency and sensitivity , the effect of reducing operation time
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Embodiment 1
[0045] Embodiment 1, the preparation (100ml) of 5 * compatible dye mixture
[0046] (1) Add 80ml of PCR grade pure water to a clean beaker;
[0047] (2) Weigh 10g of Ficoll 400 dry powder, add it into the above pure water, pay attention to mixing with a magnetic stirrer while adding, do not make Ficoll 400 agglomerate, otherwise it will affect the sedimentation effect of subsequent spotting;
[0048] (3) Take by weighing 0.02g cresol red, join in the solution of step (2), magnetic stirring aids dissolution;
[0049] (4) Take by weighing 0.08g tartrazine, join in the solution of step (3), magnetic stirring aids dissolution;
[0050] (5) Put the solution in step (4) in a 70°C incubator and heat it at high temperature to help dissolve it for 1 hour. During this period, shake vigorously every 10 minutes or so. At this time, you can see that the solution is transparent yellow-red, which is normal color;
[0051] (6) After the solution in step (5) is taken out and cooled, add an ...
Embodiment 2
[0057] Example 2, 2×PCR master mixture preparation
[0058] The 2×PCR master mixture was prepared, and the ingredients and dosage are shown in the table below:
[0059] 5× compatible dye mix 4ul
[0060] 10×reaction buffer 2ul
[0061] dNTP (10mmol / l each) 0.5ul
[0062] Taq DNA polymerase (5units / ul) 0.2ul
[0063] PCR grade pure water 3.3ul
[0064]
[0065] Total volume 10ul
[0066] Mix the components sequentially according to the order in the above table, and the preparation can be scaled up in proportion.
[0067] Among them, Taq DNA polymerase, dNTP, and 10× reaction buffer were purchased from Shanghai Shenergy Biotechnology Co., Ltd.
[0068] The 2×PCR main mixture can be divided into 1.5ml centrifuge tubes, 1ml / tube, and can be stored at -20°C for a long time under dark conditions. The normal color of the 2X PCR master mix is dark red.
Embodiment 3
[0069] Example 3 One-stop PCR does not affect the electrophoretic mobility of the product ( figure 1 )
[0070] (1) Using human Hela cell cDNA as a template (prepared with 2 μg total RNA), amplify 0.1kb, 0.2kb, 0.3kb, 0.4kb, 0.5kb, 0.75kb fragments of β-actin cDNA. The preparation of the reaction system is as follows:
[0071] 2×PCR Master Mix 10ul
[0072] Upstream primer (10uM) 0.5ul
[0073] Downstream primer (10uM) 0.5ul
[0074] Template cDNA 1μl
[0075] Water 8ul
[0076]
[0077] Total volume 20ul
[0078] (2) The reaction conditions are:
[0079] Pre-denaturation at 94°C for 2 minutes
[0080]
[0081] 72℃ 5min total extension
[0082] (3) After the PCR reaction, 5 μl of the product was taken and detected by electrophoresis on 2% agarose gel.
[0083] Depend on figure 1 The results showed that one-stop PCR had no effect on the electrophoretic mobility of PCR products.
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