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Simplex methylmalonic acidmia gene mutation detection primer pair and kit

A technology for methylmalonic acidemia and detection kits, which can be used in biochemical equipment and methods, microbial determination/inspection, DNA/RNA fragments, etc., can solve the problem of inability to meet the needs of disease typing and the difficulty of clinical promotion , high technical requirements, to achieve the effect of simple operation, high clinical promotion and good repeatability

Pending Publication Date: 2022-05-10
北京华诺奥美基因医学检验实验室有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0004] In recent years, the level of tandem mass spectrometry, enzyme detection and gene detection has developed rapidly, and relying solely on GC / MS technology and plasma amino acid detection can no longer meet the needs of disease typing
Gene mutation analysis is the most reliable basis for identification and typing. Because the mut type does not respond to vitamins, the prognosis is worse than that of the cblC type. Therefore, the identification of the mut type and the cblC type is very important clinically. However, at present, there is no specific MMA gene mutation. For the detection scheme, there is only next-generation sequencing for the detection of gene mutations in MMA patients. This method has a large throughput and high coverage, but it is expensive and technically demanding, and it is difficult to promote clinically.

Method used

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  • Simplex methylmalonic acidmia gene mutation detection primer pair and kit
  • Simplex methylmalonic acidmia gene mutation detection primer pair and kit
  • Simplex methylmalonic acidmia gene mutation detection primer pair and kit

Examples

Experimental program
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Embodiment 1

[0017] A simple methylmalonic acidemia gene mutation detection primer pair according to an embodiment of the present invention includes 3 primer pairs for the Mut gene, as shown in Table 1, the 3 primer pairs include the first A primer pair, a second primer pair and a third primer pair, the first primer pair includes a first upstream primer and a first downstream primer, the second primer pair includes a second upstream primer and a second downstream primer, and the third primer pair includes a third primer pair An upstream primer and a third downstream primer, the nucleotide sequences of the three primer pairs are respectively shown in SEQ ID NO.1-SEQ ID NO.6.

[0018] The wild-type sequence of the Mut gene is shown in SEQ ID NO.7.

[0019] Table 1. Mut detection solution sequence

[0020] Primer Sequence (5'-3') SEQ ID NO. Mut–F1 (first primer) GCTCCTATTCCACCCCTCTTCTA 1 Mut-R1 (first primer) GCAGTAACGACAGACATAAATTAGT 2 Mut-F2 (second primer...

Embodiment 2

[0022] A simple methylmalonic acidemia gene mutation detection kit according to an embodiment of the present invention, the kit includes Mut gene detection solution, amplification reaction solution, sequencing detection solution, negative control substance and positive control substance , the kit is stored at -20°C, the specification of the kit: 50 servings / box, and the specific components are shown in Table 2.

[0023] Wherein, the Mut gene detection solution includes 3 primer pairs for the Mut gene, and the nucleotide sequences of the 3 primer pairs are respectively shown in SEQ ID NO.1-SEQ ID NO.6. The amplification reaction liquid comprises Taq DNA polymerase, dNTPs, PCR amplification buffer, Mg 2+ , UNG enzyme and dUTP. The sequencing detection liquid includes sequencing dye, sequencing reaction liquid and deionized formamide. The positive control substance is a plasmid containing mutations at 25 common sites of the Mut gene, and the negative control substance is an unm...

experiment example 1

[0029] Use the self-built enterprise reference product to carry out the performance verification of the kit described in Example 2, and the specific operations are as follows:

[0030] 1. Sample processing

[0031] Enterprise reference products were selected for kit performance verification. All samples were extracted according to the nucleic acid extraction kit (product number: IVD4173), and the obtained DNA samples were stored at 2-8°C; if the samples were not used for a long time, they could be stored at -20°C.

[0032] 2. PCR amplification

[0033] Configure the PCR mixture (45 μL for each reaction) according to Table 3. Aliquot the prepared PCR mixture into 45 μL of each reaction well. Add 5 μL each of the extracted sample DNA, positive control substance, and negative control substance to the corresponding reaction wells, and carry out PCR amplification on the machine.

[0034] Table 3. PCR Mix Components

[0035] components 1 reaction volume Mut det...

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Abstract

The invention discloses a simple methylmalonic acidmia gene mutation detection primer pair and a kit, the primer pair comprises three primer pairs aiming at a Mut gene, and the nucleotide sequences of the three primer pairs are respectively shown as SEQ ID NO.1-SEQ ID NO.6. The invention further discloses a kit for detecting the mutation of the simple methylmalonic acidmia gene. The kit comprises a Mut gene detection solution, an amplification reaction solution, a sequencing detection solution, a negative reference substance and a positive reference substance, the Mut gene detection liquid comprises three primer pairs aiming at the Mut gene. According to the detection liquid of the kit, only three groups of primer pairs aiming at three hot spot mutation regions are designed, so that the mutation detection of the simple methylmalonemia gene can be completed, the mutation sites of the three hot spot mutation regions of the gene can be quickly, accurately and sensitively detected, and the experimental result is good in repeatability and high in precision.

Description

technical field [0001] The invention relates to the technical field of biological detection, in particular to a primer pair and a kit for detecting simple methylmalonic acidemia gene mutations. Background technique [0002] Methylmalonic acidemia (MMA) is a kind of hereditary metabolic disease caused by methylmalonyl-CoA mutase (methylmalonyl-CoA mutase, MCM) deficiency or cobalamin metabolism disorder. The massive accumulation of metabolites such as methylmalonic acid and methyl citrate (MCA) leads to metabolic disorders and multiple organ damage. According to whether it is combined with homocysteinemia, MMA is divided into combined type and simple type, both of which are inherited in an autosomal recessive manner. [0003] Combined MMA belongs to cobalamin metabolism disorders, including multiple subtypes. The cobalamin C (cb1C) type caused by the mutation of the cobalamin metabolism-related C gene (MMACHC) is The most common, accounting for more than 80%. Simple MMA is...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6883C12N15/11C12Q1/6869
CPCC12Q1/6883C12Q1/6869C12Q2600/156C12Q2600/16C12Q2537/143C12Q2531/113C12Q2535/101Y02A50/30
Inventor 王倩玉于超计吴文立肖江山魏星
Owner 北京华诺奥美基因医学检验实验室有限公司
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