JAK1 gene specific mutation detection kit and detection method thereof
A technology for detection kits and detection methods, applied in the field of molecular biology, can solve problems such as the inability to distinguish between wild-type genes and mutant genes
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Embodiment 1
[0038] Embodiment 1 system and method construction
[0039] Collect colorectal cancer patients who have been clinically and pathologically diagnosed and underwent resection in Fujian Province, and these patients have had cancer gene or whole exome or whole genome sequencing including JAK1 gene in a third-party gene company for clinical diagnosis and treatment (next generation sequencing method). The postoperative paraffin-embedded tissue samples were collected from these colorectal cancer patients with full informed consent and clinical diagnosis and treatment, and their genetic testing reports and data were collected. A total of 26 patients with colorectal cancer met the criteria, and the JAK1 gene mutation status (known) of the patients detected by next-generation gene sequencing is shown in Table 4. In this example, the above-mentioned JAK1 gene g.[227149insA] mutation detection kit and detection method based on the specific double-stranded DNA peptide ligase dDPlaseI will...
Embodiment 2
[0064] Embodiment 2 sample verification
[0065] A further collection of 20 middle-aged female colorectal cancer patients (40-60 years old, with an average age of 53.5 years old) diagnosed clinically and pathologically, and no metastasis was found at the time of diagnosis. During the examination, an additional 5ml of peripheral venous blood was drawn, and the cell-free DNA in the blood, namely cfDNA, was extracted with the QIAamp Circulating Nucleic Acid kit from Qiagen, Germany. Using the extracted blood cfDNA as a template, the method of the present invention and the conventional PCR-Sanger sequencing method were used to detect the g.[227149insA] mutation of the JAK1 gene with reference to Example 1, and the results are shown in Table 5. There are 9 patients with JAK1 gene g.[227149insA] mutation detected by the method of the present invention, but conventional PCR-Sanger sequencing only detects 2 of them. During the follow-up of these 20 patients, 7 of the 9 patients whose...
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