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Paralichthys olivaceus fertility related SNP molecular marker and screening method and application thereof

A technology of molecular markers and screening methods, applied in biochemical equipment and methods, microbial measurement/testing, etc., can solve the problems of mouse models that are difficult to feed, difficult to meet research needs, and enzyme activity decline, so as to achieve multiple mutations and preparation The effect of simple means and high individual homozygosity

Active Publication Date: 2019-02-26
中国水产科学研究院北戴河中心实验站
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AI Technical Summary

Problems solved by technology

At present, in order to study the CAH caused by cyp21a mutation, that is, 21OHD, people have constructed a naturally mutated 21OHD mouse model and a zebrafish model after cyp21a knockout, but the mouse model is difficult to feed, and the zebrafish model can only show cyp21a The problem with knocking out this mutant
The etiology of human 21OHD is complex, usually including homozygous mutations and complex heterozygous mutations, among which the most common homozygous mutations are Val281Leu mutations, followed by Pro30Leu, Arg339His, and Pro453Ser mutations, which may lead to a 30%-60% decrease in enzyme activity
[0003] Therefore, the current experimental animal models related to human fertility are difficult to meet the research needs; therefore, it is necessary to construct an experimental model that can meet the requirements of human fertility.

Method used

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  • Paralichthys olivaceus fertility related SNP molecular marker and screening method and application thereof
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  • Paralichthys olivaceus fertility related SNP molecular marker and screening method and application thereof

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Embodiment Construction

[0021] 1. SNP site screening of cyp21a gene

[0022] Nine 5-year-old fertile flounder and 9 5-year-old sterile double haploid (DH) flounder were selected for resequencing of the cyp21a gene, and the significant difference SNP sites were determined after sequence comparison.

[0023] 1.1 Resequencing experimental method

[0024] Primers were designed according to the published cyp21a gene sequence (Table 1), and PCR amplification and resequencing were performed on each individual.

[0025] Table 1. Primer sequences for resequencing

[0026]

[0027]

[0028] 1).PCR reaction system: (DNA 1ul, 10*buffer 5ul, MgCL2 5ul, DNTP 1ul, primer 1ul / strip, Taq enzyme 0.6ul, H2O make up to 50ul.); Reaction conditions: 94°C pre-denaturation for 3min; 94°C Denaturation for 15s, refolding at 55°C for 15s, extension at 72°C for 30s, 35 cycles; extension at 72°C for 3min.

[0029] 2).PCR product gel cutting purification:

[0030] The first step is to separate the target DNA fragment fr...

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Abstract

The invention discloses a paralichthys olivaceus fertility related SNP molecular marker and a screening method and application thereof. The screening method comprises the following steps: separately carrying out cyp21a gene re-sequencing on fertile paralichthys olivaceus and infertile DH paralichthys olivaceus at first to preliminarily screen difference SNP sites; verifying the SNP sites on a large scale by using a fertile population capable of spawning normally in a breeding season and DH infertile population incapable of spawning; carrying out parting on the SNP sites, which are obtained instep (1), of the paralichthys olivaceus by using a multiple SNaPshot SNP parting method; and carrying out statistics on genotype frequency of the SNP sites which are successful in parting by using SPSS software, and carrying out difference significance analysis by using chi-square test to screen out SNP sites related to paralichthys olivaceus fertility. In the invention, a paralichthys olivaceus fertility research model is established, a method for rapidly establishing a large number of 21OHD animal models is provided, and SNP sites of fertility related cyp21a genes are obtained by screening.

Description

technical field [0001] The invention relates to the field of biotechnology, in particular to a cyp21a gene SNP molecular marker, screening method and application related to the fertility of a flounder model of 21OHD (21 hydroxylase deficiency). Background technique [0002] cyp21a locates in human 6p21.3 and consists of two genes, true gene and pseudogene. cyp21a is a functional gene encoding 21 hydroxylase, its mutation can lead to the structural change of 21 hydroxylase and the loss or decrease of activity, thus producing a negative feedback effect to increase the synthesis of CRH and ACTH, leading to adrenal hyperplasia, clinically manifested as female Symptoms of virilization, infertility (CAH). At present, in order to study the CAH caused by cyp21a mutation, that is, 21OHD, people have constructed a naturally mutated 21OHD mouse model and a zebrafish model after cyp21a knockout, but the mouse model is difficult to feed, and the zebrafish model can only show cyp21a Kno...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6888C12Q1/6811
CPCC12Q1/6811C12Q1/6888C12Q2600/124C12Q2600/156C12Q2535/122
Inventor 张晓彦侯吉伦王桂兴王玉芬孙朝徽都伟
Owner 中国水产科学研究院北戴河中心实验站
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