c-KIT somatic mutation gene detecting kit and detecting method thereof
A technology of somatic cell mutation and somatic cells, which is applied in biochemical equipment and methods, microbial measurement/testing, DNA/RNA fragments, etc., can solve the problems of limited clinical application, low sensitivity, and high detection cost, and achieve detection High sensitivity, high detection sensitivity, and the effect of a large number of detection sites
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Embodiment 1
[0035] The present invention proposes a primer and a probe for detecting c-KIT somatic gene mutation, including a primer and a probe for detecting the mutation of exon 11 of the c-KIT gene, and a primer and probe for detecting the c-KIT gene mutation. Primers and probes for the mutation of exon 9 of the gene, primers and probes for detecting the mutation of exon 13 of the c-KIT gene, primers and probes for detecting the mutation of exon 17 of the c-KIT gene needle; the primer pair for detecting c-kit Exon11W557G mutation is SEQ ID NO:1, SEQ ID NO:5, and the detection probe is SEQ ID NO:7; the primer pair for detecting c-kit Exon11V559D mutation It is SEQ ID NO: 2, SEQ ID NO: 5, and the detection probe is SEQ ID NO: 7; the primer pair for detecting the c-kitExon11V560D mutation is SEQ ID NO: 3, SEQ ID NO: 5, and the detection probe The needle is SEQ ID NO: 7; the primer pair for detecting c-kit Exon11L576P mutation is SEQ ID NO: 4, SEQ ID NO: 6, and the detection probe is SEQ I...
Embodiment 2
[0092] Example 2: Detection of c-KIT somatic mutation gene in clinical samples using the kit of Example 1
[0093] 1. Select 5 GIST FFPE samples with known clinical results.
[0094] 2. Using Qiagen GeneRead DNAFFPE Kit to extract DNA from the above five clinical samples.
[0095] 3. Using nanodrop2000 to measure the DNA concentration and purity of the above five samples, the results are as follows:
[0096] Table 2
[0097] sample number
Concentration (ng / μl)
260 / 280
20170515
W557K558del
84.5
1.96
20170517
D816V
75.0
1.82
20180109
K642E
42.6
1.72
20180213-1
92.2
1.80
20180213-2
Y503F504insAY
55.4
1.75
[0098] 4. Dilute the DNA sample with known concentration in step 3 to 5ng / μL for later use
[0099] table 3
[0100] sample number
Sample concentration (ng / μl)
Sample volume (μl)
TE volume (μl)
Final concentration (ng / μl)...
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