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Fluorescent quantitative PCR (Polymerase Chain Reaction) detection kit for mutation T12201C of mitochondrial deafness and application of fluorescent quantitative PCR detection kit

A detection kit and fluorescence quantitative technology, applied in the fields of molecular biology and genetic engineering, can solve the problems of incomplete fluorescence quenching

Pending Publication Date: 2017-10-24
ZHEJIANG UNIV
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  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0005] Aiming at the problem of incomplete fluorescence quenching of traditional Taqman probes for fluorescent quantitative PCR, ABI Company of the United States introduced a new Taqman probe——MGB probe in 2000. Its 3' end uses a non-fluorescent quenching group. It does not emit light after absorbing the energy of the reporter group, which greatly reduces the interference of the background signal

Method used

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  • Fluorescent quantitative PCR (Polymerase Chain Reaction) detection kit for mutation T12201C of mitochondrial deafness and application of fluorescent quantitative PCR detection kit
  • Fluorescent quantitative PCR (Polymerase Chain Reaction) detection kit for mutation T12201C of mitochondrial deafness and application of fluorescent quantitative PCR detection kit
  • Fluorescent quantitative PCR (Polymerase Chain Reaction) detection kit for mutation T12201C of mitochondrial deafness and application of fluorescent quantitative PCR detection kit

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Experimental program
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Effect test

Embodiment 1

[0025] see figure 1 , the fluorescent quantitative PCR detection kit for mitochondrial deafness T12201C mutation provided by the present invention is composed of quantitative PCR reaction solution 1, first positive control substance 2, second positive control substance 3, negative control substance 4, instructions 5 and box body 6 , wherein quantitative PCR reaction solution 1 contains PCR buffer, MgCl 2 , dNTPs, thermostable DNA polymerase, upstream amplification primer, downstream amplification primer, first fluorescent probe and second fluorescent probe.

[0026] The upstream amplification primer sequence is: 5'-ATTGTGAATCTGACAACAGAGGCTTAC-3'

[0027] The downstream amplification primer sequence is: 5'-CATGAGTTAGCAGTTCTTGTGAGCTT-3'

[0028] The first fluorescent probe sequence is: 5'-FAM-ACCCCTTACTTACCG-MGB-3'

[0029] The sequence of the second fluorescent probe is: 5'-HEX-ACCCCTTATTTACCG-MGB-3'

[0030] The first positive control substance 2 is a DNA sample whose mito...

Embodiment 2

[0032] Example 2 Application of Fluorescent Quantitative PCR Detection Kit for Mitochondrial Deafness T12201C Mutation

[0033] (1) Test samples:

[0034] Forty-eight children with sensorineural deafness were diagnosed in Children's Hospital Affiliated to Zhejiang University School of Medicine. Mitochondrial DNA was extracted from peripheral blood samples of all cases as test samples using the mitochondrial DNA extraction kit from BioVision, USA.

[0035] (2) Fluorescent quantitative PCR detection

[0036]Add 5 μl of test sample, positive control substance or negative control substance to the quantitative PCR reaction solution tube, and perform PCR amplification on a two-color (or above) fluorescent quantitative PCR instrument. FAM and HEX channels are used to detect C at site 12201 base and T base. The PCR reaction conditions were pre-denaturation at 94°C for 5 minutes, 20 seconds at 94°C → 60 seconds at 60°C, a total of 40 cycles.

[0037] (3) Test results

[0038] The f...

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Abstract

The invention provides a fluorescent quantitative PCR (Polymerase Chain Reaction) detection kit for common mutation T12201C of mitochondrial deafness. The kit comprises quantitative PCR reaction solutions, a first positive control, a second positive control, a negative control, a description and a box body, wherein the quantitative PCR reaction solutions contain a PCR buffer solution, MgCl2, dNTPs, heat-resistant DNA polymerase, an upstream amplification primer, a downstream amplification primer, a first fluorescent probe and a second fluorescent probe. According to the kit provided by the invention, two MGB probes are designed for T>C mono-base mutation of a 12201th locus of mtDNA, and whether the locus is subjected to T>C mutation or not is determined through detecting 12201th nucleotide of a mitochondrion correlated to deafness by fluorescent quantitative PCR, so that the kit has the advantages of simplicity, convenience, rapidness, accuracy and the like, can be applied to the clinical diagnosis and control of deafness related to mitochondrial mutation T12201C and can also be used for providing a foundation for preventing and treating the mitochondrial deafness induced by the mutation T12201C.

Description

technical field [0001] The invention belongs to the technical fields of molecular biology and genetic engineering, and specifically relates to a fluorescent quantitative PCR detection kit for mitochondrial deafness T12201C mutation and its application. Background technique [0002] Deafness is a public health problem of global concern, which is caused by genetic and environmental factors, and more than 50% of deafness patients are caused by genetic factors. In hereditary deafness, 30% are syndromic deafness and 70% are non-syndromic deafness. The inheritance mode of deafness can show autosomal dominant inheritance, autosomal recessive inheritance, X-linked inheritance and maternal inheritance. Mitochondrial DNA (mtDNA) mutation is one of the important causes of maternal hereditary deafness, and the incidence of hereditary deafness is The rate is about 1% to 2%. [0003] Deafness-related mtDNA tRNA gene mutations involve 16 tRNAs, and the T12201C mutation is located in the ...

Claims

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Application Information

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IPC IPC(8): C12Q1/68
CPCC12Q1/6858C12Q2531/113C12Q2561/101C12Q2545/113
Inventor 舒强尚世强李伟陶然
Owner ZHEJIANG UNIV
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