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Nosema bombycis Met-AP2 gene and application thereof

A technology of microsporidia and silkworm, applied in the fields of application, genetic engineering, plant genetic improvement, etc., can solve the problems of false positives, low sensitivity of primers, etc., and achieve the effects of accurate screening, good detection sensitivity, and convenient use

Active Publication Date: 2015-05-27
SOUTH CHINA AGRI UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Most of the target genes designed for the PCR detection technology of silkworm microsporidia are SSU rRNA, and the primers designed for other microsporidian genes are less or have poor sensitivity, so they are rarely reported
Baker et al (1995) and Terry et al (1999) designed PCR primer V1f / 530r based on the highly conserved region of SSU rRNA of similar species of Microsporidia, which can identify DNA templates of various species of Microsporidia and amplify about 450bp Specific purpose bands, but often have problems such as false positives

Method used

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  • Nosema bombycis Met-AP2 gene and application thereof
  • Nosema bombycis Met-AP2 gene and application thereof
  • Nosema bombycis Met-AP2 gene and application thereof

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0048] Example 1 Cloning of the Met-AP2 gene of Bombyx mori Nos.

[0049] 1. Primer design

[0050] Based on the genome analysis data, the Met-AP2 gene of other species was analyzed, and combined with various microsporidian genomes for homology analysis, a pair of primers MC-F / MC-R was designed through the primer design software Primer5.0, The primer sequences are as follows:

[0051] Upstream primer MC-F (SEQ ID NO.4): ATGAGGCCTATTGTTTTATCAGAAG;

[0052] Downstream primer MC-R (SEQ ID NO. 5): TTAAAAATCATCTCCTTTTGTAAGA.

[0053] 2. PCR amplification

[0054] The DNA and cDNA of Bombyx mori were respectively used as templates, and primers MC-F / MC-R were used for PCR amplification. The reaction system and reaction procedure were as follows:

[0055] The PCR reaction system (total volume 20 μL):

[0056] 2×Taq Master Mix (reaction buffer) 10μL

[0057] 10 μM upstream primer 0.5 μL

[0058]10 μM downstream primer 0.5 μL

[0059] Template DNA 1 μL;

[0060] wxya 2 O to ...

Embodiment 2

[0068] Example 2 Detection primer design and establishment of PCR amplification method

[0069] 1. Primer design

[0070] (1) On the basis of obtaining the Met-AP2 gene of No. silkworm, 14 pairs of primers were designed using Primer premier 5.0 software. The sequences of each set of primers are as follows:

[0071] Upstream primer MC-F (SEQ ID NO.4): ATGAGGCCTATTGTTTTATCAGAAG;

[0072] Downstream primer MC-R (SEQ ID NO. 5): TTAAAAATCATCTCCTTTTGTAAGA.

[0073] Upstream primer 2047-F (SEQ ID NO.6): GGAGAAGGGTGATGGAATAG;

[0074] Downstream primer 2047-R (SEQ ID NO. 7): CGACGGTAGATAACCACATA.

[0075] Upstream primer M6-F (SEQ ID NO.8): CCCCTAAATGAGGCC;

[0076] Downstream primer M6-R (SEQ ID NO.9): CCTATTCCATCACCCT.

[0077] Upstream primer M7-F (SEQ ID NO.10): CCCCTAAATGAGGCC;

[0078] Downstream primer M7-R (SEQ ID NO.11): TGGAAGCACGGTAAA.

[0079] Upstream primer M8-F (SEQ ID NO.12): TTTCTGCTCCCCTAAA;

[0080] Downstream primer M8-R (SEQ ID NO. 13): TTCCATCACCCTTCTC....

Embodiment 3

[0116] Example 3 Primer Specific Detection

[0117] 1. Take No. silkworm, No. mulberry borer, No. mulberry looper, No. litura, No. xylostella, No. rapae, No. tussah, No. zhejiang worm, No. corn borer or No. megasporosa Shandong as templates, using the PCR method of Example 2, the detection specificity of the 7 pairs of primers screened in Example 2 was studied.

[0118] 2. The results showed that only five pairs of primers, MC-F and MC-R, 2047-F and 2047-R, M5-F and M5-R, M6-F and M6-R, M7-F and M7-R, could There are many types of microsporidia detected, and 7, 6, 5, 5 and 4 types of microsporidia can be detected respectively. Specific as attached Figure 3-6 shown.

[0119] Among them, MC-F and MC-R detect the most types of microsporidia, and can simultaneously detect No. There are 7 common main microsporidia in mulberry gardens, including microsporidia, microsporidium rapae and microsporidium tussah, which have the best detection versatility and have a good application...

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Abstract

The invention discloses a nosema bombycis Met-AP2 gene and an application thereof in the aspect of nosema detection, as well as a group of universal nosema detection primers and a kit. The universal detection primers include an upstream primer MC-F and a downstream primer MC-R, wherein the nucleotide sequence of the upstream primer MC-F is as shown in SEQ ID NO. 4 and the nucleotide sequence of the downstream primer MC-R is as shown in SEQ ID NO.5. The detection primers take the gene Met-AP2 as a target gene and the detection primers are simultaneously applicable to the detection of various nosemas; the detection primers are reliable in detection result, easy in operation and high in sensitivity, and especially, the detection primers have an important practical application value for the early detection of various nosemas in a sample in practical inspection and quarantine.

Description

technical field [0001] The invention belongs to the field of biotechnology. More specifically, it relates to the Met-AP2 gene of Bombyx mori and its application. Background technique [0002] The pathogen of silkworm microsporidiosis is a kind of intracellular obligate parasitic eukaryote, which has been classified as a protozoa before, and has been classified as a fungus in recent years. Because of its characteristics of vertical transmission, it has become the most concerned one among the pathogenic microorganisms of silkworm, and it is also the only epidemic disease in the pathogenic microorganisms of silkworm under legal quarantine. From the discovery in the 19th century to the present, the silkworm microsporidiosis has caused huge losses to the sericulture industry in various countries. In addition, other different microsporidia can also attack other insects such as bees and locusts, aquatic products such as fish, mammals such as rabbits and dogs, and even humans, ca...

Claims

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Application Information

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IPC IPC(8): C12N15/30C07K14/44C12Q1/68C12Q1/04
CPCC12Q1/68C12N1/105C12R2001/90Y02A50/30
Inventor 刘吉平杨思佳
Owner SOUTH CHINA AGRI UNIV
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