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Method for constructing sequencing library by cyclizing method

A sequencing library and cyclization technology, which is applied in the field of genetic engineering, can solve problems such as the inability to construct small fragment nucleic acid molecular sequencing libraries, and achieve the effects of expanding the scope of application and improving efficiency

Active Publication Date: 2012-08-08
盛司潼
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AI Technical Summary

Problems solved by technology

[0006] The purpose of the present invention is to provide a new method for constructing a sequencing library by circularization, aiming to solve the problem that the existing technology has strong limitations on the size of raw materials when constructing a sequencing library, and the circularization method cannot be used to analyze small fragments. Nucleic Acid Molecules for Sequencing Library Construction

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  • Method for constructing sequencing library by cyclizing method
  • Method for constructing sequencing library by cyclizing method
  • Method for constructing sequencing library by cyclizing method

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Embodiment approach

[0054] figure 1 An embodiment of the method for constructing a sequencing library of the present invention is shown, comprising the steps of:

[0055]S1. Ligating the nucleic acid fragments with the connecting element, and performing circularization in a form that does not increase its size, to obtain a first circular molecule; the connecting element contains at least one restriction enzyme recognition site;

[0056] S2. Based on the digestion recognition site described in step S1, the nucleic acid fragment in the first circular molecule is digested with an endonuclease, and the digested product is connected to the bridging component and cyclized to obtain a bridging cyclized product.

[0057] It should be noted:

[0058] In step S1, the nucleic acid fragment can be any fragment in the genome, including but not limited to a gene, a part of a gene, a regulatory sequence, an intron or a part of an intron; it can also be genomic DNA, cDNA, RNA ( Including but not limited to mRN...

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Abstract

The invention relates to the field of genetic engineering and provides a method for constructing a sequencing library by a cyclizing method. The method comprises the following steps: (A) connecting a nucleic acid fragment with a connecting module and cyclizing the nucleic acid fragment and the connecting module without increasing the sizes of the both so as to obtain a first cyclized molecule, wherein the connecting module contains at least one enzyme digestion recognition site; and (B) on the basis of the enzyme digestion recognition site in the step (A), carrying out enzyme digestion on the nucleic acid fragment in the first cyclized molecule by using incision enzyme, connecting an enzyme digestion product with a bridging module, and cyclizing the enzyme digestion product and the bridging module so as to obtain a bridged cyclic compound. The method provided by the invention has a wide application range; known sequences can be inserted into small fragment nucleic acid molecules in an oriented way so as to construct the sequencing library; and the cyclizing efficiency in the library constructing process can be further increased.

Description

technical field [0001] The invention relates to the field of genetic engineering, in particular to a method for constructing a sequencing library by circularization. Background technique [0002] In the past few years, second-generation high-throughput sequencing technology has achieved rapid development. Among them, the method of sequencing based on ligase has the advantage of high accuracy, but the application of this type of sequencing method is limited due to its short single read length. In response to this situation, in recent years, there has been a method to improve the sequencing read length by constructing a sequencing library with a special structure, that is, inserting one or more linker sequences in the fragment to be tested, so that the same sequencing library molecule has multiple connections Sequence the starting sites, and then perform ligation sequencing on these different starting sites, thereby increasing the sequencing read length. The core of this met...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C40B40/06C40B50/06C12N15/10
Inventor 盛司潼
Owner 盛司潼
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