Primer and probe sequence for fluorescence RAA detection of vibrio parahaemolyticus and application thereof
A technology of vibrio hemolyticus and probe sequence, applied in the direction of microorganism-based methods, biochemical equipment and methods, DNA/RNA fragments, etc., can solve the problem of undisclosed vibrio parahaemolyticus, shorten the detection time, and reduce the death rate The effect of high rate and rapid detection
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Embodiment 1
[0020] For the specific conservative area of the sub-conservatory, a specific primer and a fluorescent Ra A probe is designed: the forward primer is 5'-gcaatcgtgaaccagaagcgcccagtagtacct-
[0021] 3 ';
[0022] The reverse primer is 5'-gtagcgttcaatgcactgctcaatagaaggcc-3 ';
[0023] Oligonucleotide probe: 5'- Attttggcactattactaccgattgcg (FAM-DT) AC (THF) GC (BHQ-DT) Gtttacaaaccctgcg-3 ' ;
[0024] Among them: FAM: 6-carboxy fluorescein; THF: tetrahydrofuran; BHQ: Black hole quencher (Chinese meaning); phosphate: 3 'for phosphorylation to abort extension.
Embodiment 2
[0026] A fluorescence RAA method for detecting a sub-conservatory, including the following steps:
[0027] 1. Extraction of Sample DNA: Sub-hexophagus Standard strain and isolate strain in cerebral leaching medium, 3-24 hours, add DNA extract (Cador Pathogen 96qiacube HT kit, Germany Kaijie) to extract DNA, Sub-equipment, freezing to -80 ° C;
[0028] 2, in order to detect the sample DNA as a template, an RAA reaction liquid, a enzyme mixture, or the like are added to the RAA reaction system, and the amplification reaction is performed, wherein the reaction system is as follows: 25 μL RaA reaction buffer; forward primer, reverse primer (10 μm 2.1 μL; 0.6 μL of probe (10 μm); 2 μLDNA template; add 15.5 μl double steamed water to 47.5 μL, mix well, then added to dry powder (containing recombinase, single-stranded binding protein, D NA polymerase, Reactive buffer, DNTP, etc., RAA nucleic acid expansion kit (fluorescence) Item No .: F0 0001, Jiangsu Qi Tian Genetic Technology Co., Ltd...
Embodiment 3
[0041] Standard strain testing experiment
[0042] The experiment verifies whether the detection method detects a bacterial standard strain, and the above-described example 2 method is used to detect the transduction of the cerebral leaching medium from the conversion of the cerebral leaching medium, the concentration of the secondary growth period, the concentration of about 5 × 10 8 CFU / ML, experimental results reference figure 1 .
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