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A correction method for multi-batch targeted metabonomic data

A technology for metabolomics data and correction methods, applied in scientific instruments, measuring devices, instruments, etc., can solve problems such as metabolic data errors, achieve accurate system errors, simple and convenient processing, and improve quality.

Active Publication Date: 2018-12-04
BEIJING HARMONY HEALTH MEDICAL DIAGNOSTICS CO LTD
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  • Abstract
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  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Targeted metabolomics is the detection and analysis of targeted metabolites. It is often necessary to analyze and verify a large number of samples. Usually, a large number of samples need to be tested in multiple batches, and the state of instrument response between batches may vary. Different, resulting in errors in metabolic data between different batches. In order to integrate and analyze multiple batches of data from different batches, different personnel, and different instruments, we have established a correction method for multiple batches of targeted metabolomics data. Can meet the needs of long-term targeted metabolomics analysis

Method used

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  • A correction method for multi-batch targeted metabonomic data
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  • A correction method for multi-batch targeted metabonomic data

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Embodiment

[0030] The present embodiment will use the method of the present invention to measure the concentration of alanine in 728 serum samples, it adopts liquid chromatography-triple quadrupole tandem mass spectrometry (LC-MS / MS) to measure alanine in 728 serum samples Concentration, 728 cases of serum samples including 418 cases of healthy people, 106 cases of gastric cancer patients, 204 cases of lung cancer patients. All samples were detected and analyzed in 8 different batches of experiments, of which 91 cases were in the first batch, 101 cases in the second batch, 101 cases in the third batch, 71 cases in the fourth batch, and 71 cases in the fifth batch. There are 111 examples, the sixth batch has 91 examples, the seventh batch has 101 examples, and the eighth batch has 61 examples. The present invention is illustrated below with the first batch of 91 samples as an example:

[0031] The present invention is a method for correcting multi-batch targeted metabolomics data, which c...

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Abstract

A correction method for multi-batch targeted metabonomic data is provided. The method includes collecting a plurality of samples same as a sample to be detected to form QC samples; adding a QC samplebefore the sample to be detected to form a first QC sample, inserting one QC sample in subsequent each 8-15 samples to be detected, recording the sample inserting number n of the inserted QC samples,and performing detection and analysis on all samples in the batch under completely same conditions to obtain the concentration of a target metabolite of each sample of the batch; constructing a related linear fitting machine that is Y=a*n+b, with ratios Y of the detected concentrations of the target metabolite in all the QC samples to the concentrations of the target metabolite in the first QC samples detected in the first batch being adopted as vertical coordinates, and the sample inserting numbers ns of all QC samples of the batch being adopted as horizontal coordinates; and substituting thesample inserting number n of each sample of each batch into the equation to obtain a correction factor of each sample of the batch, and subjecting each sample to system error correction.

Description

technical field [0001] The invention relates to the fields of analytical chemistry and metabolomics, and is a method for correcting multiple batches of metabolomics data. Background technique [0002] Metabolomics is another important research field of systems biology after genomics and proteomics. It is based on group index analysis, high-throughput detection and data processing, and information modeling and system integration. The goal is to qualitatively identify and quantitatively describe the expression and modification changes of small molecule metabolites in biological matrices, reflecting the changes in the metabolic response of cells or tissues to external stimuli or genetic modifications. Targeted metabolomics is the detection and analysis of targeted metabolites. It is often necessary to analyze and verify a large number of samples. Usually, a large number of samples need to be tested in multiple batches, and the state of instrument response between batches may va...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): G01N30/02
CPCG01N30/02
Inventor 许丽倪君君
Owner BEIJING HARMONY HEALTH MEDICAL DIAGNOSTICS CO LTD
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