A Rapid Screening Method for Metabolite Peptide Aptamers Based on Molecular Docking Technology
A technology of molecular docking and screening methods, applied in the field of interdisciplinary science, can solve the problems of slow research progress, cumbersome polypeptide content, human and material resource consumption, etc., and achieve the effect of wide target range, increased storage capacity, and fast speed.
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[0027] The rapid screening method of the amino acid peptide based on molecular docking technique includes the following steps:
[0028] (1) Determine the target metabolite (amino acid);
[0029] (2) Get a polypeptide library with target potential binding: as an amino acid as a goal, selection of download and people (1679), common test animal mice (6940), rat (4020), rat (4020), Pig (1546) of the protein primary structure associated with amino acid metabolism, is its amino acid sequence. All amino acid sequences are connected to a long peptide chain; set the short peptide chain length of 8 amino acid residues, and the cut removal sequence is obtained to obtain a non-redundant polypeptide library library2, the storage is about 2.285 million polypeptides;
[0030] (3) Using Autodock, the molecules in the three-dimensional structure database known in the polypeptide library library 2 are placed on the active site of the target molecule, and the second-plane angle of the position, conf...
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