Novel protein sequence representation method based on gene ontology information
A technology of protein sequence and gene ontology, which is applied in the field of protein sequence representation based on gene ontology information, can solve the problem of low prediction rate of label positioning, achieve the effect of expanding the scope of use, broad application prospects, and improving the success rate of prediction
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[0020] In order to make the object, technical solution and advantages of the present invention more clear, the present invention will be further described in detail below in conjunction with the examples. It should be understood that the specific examples described here are only used to explain the present invention, and are not intended to limit the present invention. The example here is an algorithm for predicting subcellular multi-labels of animal proteins.
[0021] Using the new gene ontology information-based protein sequence representation method of the present invention, the specific steps are as follows:
[0022] 1) Use the BLAST program to search the Swiss-Prot database to find all similar protein sequences of protein sequence P.
[0023] Protein P can be directly input to the BLAST tool web page of the Swiss-Prot database, its URL is http: / / www.uniprot.org / blast / , BLAST operation parameters are default, and BLAST can also be downloaded from NCBI for local configurati...
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