Application of DNAH14 gene in tumor diagnosis and treatment
A gene and gene expression technology, applied in the application field of DNAH14 gene in the diagnosis and treatment of lung adenocarcinoma, can solve the problems of lack of specificity, low sensitivity, drug resistance, etc.
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Embodiment 1
[0089] Example 1 Screening for Gene Markers Related to Lung Adenocarcinoma
[0090] 1. Sample collection
[0091] Paracancerous tissue and lung adenocarcinoma tissue samples were collected from 8 cases of lung adenocarcinoma. The tumor tissue specimens of lung adenocarcinoma were collected from the main tumor area, which was located at the junction of the middle and outer 1 / 3 of the tumor mass and normal tissue, excluding the obvious necrosis and calcification of the tumor center and the normal lung tissue around the tumor; the normal lung tissue specimens adjacent to the tumor were obtained from tumor There is no obvious change in the part above 5cm from the edge. All the above specimens were obtained with the consent of the organizational ethics committee.
[0092] 2. RNA sample preparation (using miRNA kit for operation)
[0093] Introduce liquid nitrogen into the mortar, take the tissue obtained above and put it into the mortar, cut it into pieces in liquid nitrogen a...
Embodiment 2
[0115] Example 2 QPCR sequencing to verify the differential expression of DNAH14 gene
[0116] 1. Large-sample QPCR verification of differential expression of DNAH14 gene. According to the sample collection method in Example 1, 50 cases of lung adenocarcinoma paracancerous tissues and 50 cases of lung adenocarcinoma tissues were selected.
[0117] 2. The RNA extraction steps are as described in Example 1.
[0118] 3. Reverse transcription
[0119] 1) Reaction system:
[0120] RNA template 1 μl, random primer 1 μl, double distilled water was added to 12 μl, mixed, centrifuged at low speed, 65 ° C for 5 min, and then cooled on ice.
[0121] Continue to add the following components to the 12 μl reaction solution:
[0122] 5× reaction buffer 4μl, RNase inhibitor (20U / μl) 1μl, 10mM dNTP mixture 2μl, AMV reverse transcriptase (200U / μl) 1μl; mix well and centrifuge;
[0123] 2) Reverse transcription reaction conditions
[0124] 5 minutes at 25°C, 60 minutes at 42°C, and 5 minut...
Embodiment 3
[0141] Example 3 Silencing of DNAH14 Gene
[0142] 1. Cell culture
[0143] Human lung adenocarcinoma cell line A549 was incubated in RPMI1640 medium containing 10% fetal bovine serum and 1% P / S at 37°C, 5% CO 2 , Cultivated in an incubator with a relative humidity of 90%. Change the medium once every 2-3 days, and use 0.25% EDTA-containing trypsin for routine digestion and passage.
[0144] The cells in the culture flask were digested with trypsin and seeded in a 6-well plate to ensure that the number of cells was 2-8×10 5 cells / well, add cell culture medium. Overnight, observe the cell density the next day, and transfection can be performed when the cell density is above 70%.
[0145] 2. Design of siRNA
[0146] Negative control siRNA sequence (siRNA-NC):
[0147] The sense strand is 5'-UUCUCCGAACGUGUCACGU-3' (SEQ ID NO.7)
[0148] The antisense strand is 5'-ACGUGACACGUUCGGAGAA-3' (SEQ ID NO.8)
[0149] siRNA-1:
[0150] The sense strand is 5'-UCAUAUCUUAAAAGUCUUGGU-...
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