Duck-derived material droplet type digital PCR (Polymerase Chain Reaction) absolute quantitative detection kit

A detection kit, micro-droplet digital technology, applied in the direction of microbial measurement/inspection, biochemical equipment and methods, etc., can solve the problem of inability to detect adulterated samples, can not reflect the core concept of digital PCR, fluorescent PCR technology detection Low lower limit and other problems, to achieve the effect of high sensitivity

Inactive Publication Date: 2016-04-13
BEIJING SEAGULL BIOVENTURES & BIOTECH CO LTD
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  • Abstract
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AI Technical Summary

Problems solved by technology

In recent years, fluorescent PCR technology has been widely used in detection fields such as adulteration identification. It uses PCR technology to efficiently amplify DNA and combines high specificity and sensitivity of probe technology to overcome the shortcomings of tissue identification and ordinary PCR methods. However, the detection limit of fluorescent PCR technology is still very low, and it is impossible to detect a small amount of adulterated samples, so the concept of digital PCR was proposed
[0008] The concept of digital PCR was adopted and published by Bert Vogelstein as early as 1999, and its original intention was to detect a small amount of mutant cells from a large number of normal somatic cells in clinical samples (such as urine, lymph, plasma, feces, etc.) , but because the consumables that could be used to dilute samples at that time were only 384-well plates, it could not reflect the core concept of digital PCR very well - "terminal dilution" (terminal dilution, also called partition in some literature)

Method used

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  • Duck-derived material droplet type digital PCR (Polymerase Chain Reaction) absolute quantitative detection kit
  • Duck-derived material droplet type digital PCR (Polymerase Chain Reaction) absolute quantitative detection kit
  • Duck-derived material droplet type digital PCR (Polymerase Chain Reaction) absolute quantitative detection kit

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Experimental program
Comparison scheme
Effect test

Embodiment 1

[0035] Design and screening of embodiment 1 primers and probes

[0036] 1. Design of primers and probes of the present invention: purchase 2 kinds of commercially available meat ducks, 1 kind of shelduck duck, and 1 kind of wild duck, and design according to the duck (Anasplatyrhynchos) mitochondrial genome sequence (HM010684.1) published by Genbank to amplify the duck The general primers of the 813bp partial sequence (61-873) of the cytochrome b gene were extracted from the total DNA of different varieties of duck as templates, and the specific primers suitable for ddPCR were designed. This example gives the process of screening the best primers, select several pairs of alternative primers designed by software for screening, the alternative primers are as follows, see Table 1.

[0037] Table 1

[0038]

[0039]

[0040] 2. Screening of primers

[0041] (1) The primers are randomly matched into four pairs: F1R1, F1R2, F2R1, F2R2;

[0042] (2) Then use the dye method to ...

Embodiment 2

[0049] Example 2 Optimization of the annealing temperature of the PCR method for detecting duck-derived components on the ddPCR platform.

[0050] 1. Select the combination of primers and probes as: F2R2+P2.

[0051] 2. Then on the ddPCR platform, ddPCR system formula: 2XddPCRSupermixforprobes10μL, upstream primer, downstream primer 1μL, probe 0.5μL, RNaseFreedH 2 O3.5 μL, positive template 4 μL, total volume 20 μL (concentration of both primers and probes is 10 μM). Do 8 replicate wells and generate microdroplets.

[0052] 3. Amplify on a PCR instrument. The PCR amplification program is 95°C for 10 minutes; 94°C for 30 sec; reaction. Detection on the droplet digital PCR detector.

[0053] 4. Analyzing results: Select an annealing temperature of 55-58°C according to the experimental results.

Embodiment 3

[0054] The optimization experiment of embodiment 3 primers, probe concentration

[0055] The concentrations of the designed primers and probes were all 10 μM, and the combination was F2R2P2. The system configuration method is shown in Table 2.

[0056] Table 2

[0057]

[0058] Then micro-droplets were generated on the ddPCR platform, transferred to a 96-well plate, and sealed with an aluminum film.

[0059] Amplify on a PCR instrument, and the PCR amplification program is 95°C for 10 minutes, denaturation at 94°C for 30 sec, and annealing at 58°C for 60 sec, a total of 40 cycles; 98°C for 10 min to end the reaction. Detection on the droplet digital PCR detector.

[0060] Analysis results: Select the F2R2+P2 primer-probe formula according to the experimental results: 1.8 μL for primers and 0.6 μL for probes.

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Abstract

The invention relates to a duck-derived material droplet type digital PCR (Polymerase Chain Reaction) absolute quantitative detection kit which mainly comprises droplet digital PCR detection reagents and a plurality of droplet generator cards. The droplet type digital PCR detection reagents include different reagents which are packaged by an outer package and are labeled with names, batch number, production date and period of validity. The kit has the advantages of high sensitivity, accuracy, precision, repeatability and capability of achieving quantitative detection without standard curves, effectively detects counterfeit products, is a rapid, sensitive and accurate duck-derived material detection kit, and provides an effective way to detect duck-derived materials.

Description

technical field [0001] The invention relates to the technical field of biological detection, in particular to a microdroplet digital PCR absolute quantitative detection kit for duck-derived components and a detection method thereof. Background technique [0002] Duck-derived materials are DNA fragments of duck species. [0003] Many of the beef, mutton and meat products sold in the market are mixed with duck meat and sold as beef and mutton. In order to make up for the lack of mutton flavor, some even add additives such as mutton powder and mutton extract to whitewash their adulteration. Serious adulteration and fraudulent behaviors have appeared on the Internet, such as "selling duck meat with a sheep's head", adding mutton flavor to duck meat to make mutton to deceive consumers. This is not only a violation of relevant regulations, but also a kind of commercial fraud. [0004] Meat adulteration and adulteration are important issues in the food industry. In view of the cur...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68
CPCC12Q1/6851C12Q2531/113C12Q2545/113C12Q2563/159
Inventor 陈晨华蕾史艳于刘静秋王莹马付坤闫慧张静依
Owner BEIJING SEAGULL BIOVENTURES & BIOTECH CO LTD
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