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Method for separating copper proteome by using copper-chelated magnetic beads

A copper protein and magnetic bead separation technology, which is applied in the field of protein chemistry, can solve the problems of difficult separation of metalloproteome, limited use range, and low price, and achieves the effects of avoiding aggregation and precipitation, stable complexes, and simple procedures.

Inactive Publication Date: 2015-11-25
HENAN UNIV OF SCI & TECH
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, the disadvantage of this method is that NTA is very toxic, and the price is not cheap, and the scope of application is limited.
[0006] Since the metal-binding sites of most proteins in the natural state exist inside the molecule, it is difficult for us to isolate the complete metalloprotein group by immobilizing the metal, but this has not been addressed in the previous research literature on metal-binding proteins. consider

Method used

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  • Method for separating copper proteome by using copper-chelated magnetic beads
  • Method for separating copper proteome by using copper-chelated magnetic beads
  • Method for separating copper proteome by using copper-chelated magnetic beads

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0036] 1. Preparation of magnetic beads with surface chelated copper

[0037] (1) Activation of hydroxyl magnetic beads: add 5M sodium hydroxide solution to hydroxyl magnetic beads (Luoyang, Huier Nano) to make the pH value reach 12-14, and obtain fully activated magnetic beads (concentration: 10mg / ml ).

[0038] (2) Epoxidation: (1) Add dimethyl sulfoxide, epichlorohydrin and 5M sodium hydroxide solution to the obtained activated hydroxyl magnetic beads (the volume ratio of magnetic beads, epichlorohydrin and sodium hydroxide solution is 1 :2:1:4), stirred slowly at 60°C overnight and then washed to neutral to connect epoxy groups to obtain epoxidized magnetic beads.

[0039](3) Chelating-based IDA coupling: (2) Add 1 volume of IDA (10%, adjusted to pH 8 with 1M sodium hydroxide) to each ml of the obtained epoxidized magnetic beads (10mg / ml), slowly Stir for 10 hours, wash until neutral and blot dry to obtain metal chelate magnetic beads (magnetic beads-IDA).

[0040] (4) ...

Embodiment 2

[0050] A method for separating copper proteomes using copper chelated magnetic beads, comprising the following steps:

[0051] (1) Take the biological tissue or cell and grind it sufficiently with liquid nitrogen, add protein extract, mix well, and centrifuge at low temperature to obtain denatured protein solution; the solid-liquid ratio of the biological tissue or cell to the protein extract after grinding is: 1:4; the composition of the protein extract solution is: every liter of protein solution contains 50mmol / L sodium phosphate, pH7.8, 300mmol / L sodium chloride, 0.1% by mass TritonX-100, 8mol / L Urea, the balance being water;

[0052] (2) According to the volume ratio of 10 mg / ml copper chelated magnetic beads and denatured protein solution volume ratio of 1:1, mix copper chelated magnetic beads with a concentration of 10 mg / ml with the denatured protein solution obtained in (1) Mix the protein solution and incubate at 25°C-37 for 15-30min to obtain a magnetic bead protei...

Embodiment 3

[0059] A method for separating copper proteomes using copper chelated magnetic beads, comprising the following steps:

[0060] (1) After the biological tissue or cells are fully ground with liquid nitrogen, add protein extract, mix well, and centrifuge at 15000g for 30min at 4°C to obtain denatured protein solution; after grinding, biological tissue or cell and protein extract The solid-liquid ratio is: 1:4; the composition of the protein extract is: every liter of protein solution contains 50mmol / L sodium phosphate, pH7.8, 300mmol / L sodium chloride, and the mass percentage is 1% TritonX -100,8mol / L urea, the balance is water;

[0061] (2) According to the volume ratio of 10 mg / ml copper chelated magnetic beads and denatured protein solution volume ratio of 1:1, mix copper chelated magnetic beads with a concentration of 10 mg / ml with the denatured protein solution obtained in (1) Mix the protein solution and incubate at 25°C-37 for 15-30min to obtain a magnetic bead protein m...

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Abstract

The invention discloses a method for separating copper proteome by using copper-chelated magnetic beads, and relates to the technical field of protein chemistry. The method comprises the following steps: taking a biological tissue or cell, after fully grinding with liquid nitrogen, adding protein extracting liquid, and after uniformly mixing, carrying out low-temperature centrifugation, so as to obtain a denatured protein solution; mixing the copper-chelated magnetic beads with the denatured protein solution, and incubating to obtain a magnetic bead protein mixed solution; adding a buffer solution 1 with the volume 1 time of that of the magnetic bead protein mixed solution into the magnetic bead protein mixed solution for suspension, pouring half of the supernate under the external magnetic field, and repeating for 4-5 times to obtain a mixed solution A; adding a buffer solution 2 with the volume 1 time of that of the mixed solution A into the mixed solution A, separating all the specific copper-binding proteins, namely, the copper proteome, and collecting the copper proteome under the external magnetic field. According to the method, the metalloproteome is separated under a denaturing condition by using magnetic bead-IDA, so that the procedures are greatly simplified, and the obtaining efficiency of metalloproteins is improved; a method suitable for separating the metalloproteome from the tissue or cell under the excess heavy metal treatment condition is established.

Description

technical field [0001] The invention relates to the technical field of protein chemistry, in particular to a method for separating copper proteomes by using copper chelating magnetic beads. Background technique [0002] The National Pollution Survey Bulletin shows that the total rate of soil pollution in the country is 16.1%, of which heavy metal pollution accounts for more than 80%. Most of the heavy metals in the soil are easy to accumulate in plants and endanger human health through the food chain. On the other hand, because the cysteine, methionine, and histidine residues of proteins have high affinity for divalent metal ions, excessive heavy metals in cells may interfere with the binding of essential metal elements to proteins, Cause protein denaturation or enzyme inactivation, interfere with normal metabolic process. [0003] Proteomics technology has become an important research method in the field of functional genomics. All proteins with metal binding sites in a ...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C07K1/14C07K14/415
Inventor 张红晓王发园侯典云
Owner HENAN UNIV OF SCI & TECH
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