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Method for nucleic acid sequencing

A technology of nucleic acid sequencing and nucleic acid sequence, which is applied in the direction of biochemical equipment and methods, microbial measurement/inspection, etc., can solve the problems of cumbersome steps and large consumption of reagents, reduce error messages, ensure accuracy, avoid mutations and wrong effect

Inactive Publication Date: 2014-03-26
SUZHOU INST OF BIOMEDICAL ENG & TECH CHINESE ACADEMY OF SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

The steps are cumbersome and the consumption of reagents is large

Method used

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  • Method for nucleic acid sequencing

Examples

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Embodiment 1

[0013] Example 1: Escherichia coli exonuclease III (exo III) was used to degrade phosphodiester bonds in double-stranded DNA molecules. Catalytic double-stranded DNA releases 5'-mononucleotides from the 3'-OH end in the direction of 3'→5', and then detects the released single nucleotides one by one to achieve sequencing.

Embodiment 2

[0014] Example 2: Using lambda bacteriophage exonuclease (λexo) to catalyze the degradation of double-stranded DNA molecules from the 5'-P end to carry out step-by-step hydrolysis to release 5'-mononucleotides, and then detect the released single nucleotides one by one Detection, enabling sequencing.

Embodiment 3

[0015] Example 3: Escherichia coli exonuclease I (exo I) was used to degrade single-stranded DNA molecules, and the cleavage products were identified and sequenced, thereby realizing the sequencing of the entire sequence.

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PUM

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Abstract

The invention discloses a method for nucleic acid sequencing through adopting nuclease digestion reaction. The method includes the following steps: (1), performing digestion and degradation on a nucleic acid target sequence through an enzyme, so as to generate an enzyme-digested product; (2), detecting the enzyme-digested product, and finally obtaining information of the nucleotide sequence. The method provided by the technical scheme is used for cutting the target sequence and determining an unknown sequence through the exonuclease, and is realized through utilizing the biodegradability of the exonuclease and sequencing the enzyme-digested product generated from degradation, so as to determine the enzyme-digested product.

Description

technical field [0001] The invention relates to a method for gene sequencing, in particular to a method for measuring unknown sequences by cutting target sequences with exonuclease. Background technique [0002] In the 1970s, the British biochemist Sanger and the American biochemist Gilbert established two nucleic acid sequencing technologies based on different principles, the DNA terminal termination method and the chemical degradation method, which created a precedent for the development of modern nucleic acid sequencing technology. Sanger and Gilbert both won the Nobel Prize in Chemistry for this. [0003] The basic principle of the chemical degradation method is that the chemical reagents process the final DNA fragments, resulting in base-specific cleavage, producing a set of reaction mixtures with various lengths of DNA chains, which are separated by gel electrophoresis, and finally sequenced through data analysis . Chemical degradation methods have been stalled becau...

Claims

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Application Information

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IPC IPC(8): C12Q1/68
CPCC12Q1/6869C12Q2521/319
Inventor 韩坤白鹏利缪鹏程文播刘涛钱俊唐玉国
Owner SUZHOU INST OF BIOMEDICAL ENG & TECH CHINESE ACADEMY OF SCI
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