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Microfluidic apparatus, systems, and methods for performing molecular reactions

a microfluidic device and molecular reaction technology, applied in biochemistry apparatus and processes, instruments, material analysis, etc., can solve the problems of more side reactions, laborious and expensive methods for determining nucleic acid sequence information, and low reaction yield of desired produ

Inactive Publication Date: 2010-06-17
SUNDARARAJAN NARAYANAN +6
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Current methods for determining nucleic acid sequence information are laborious, expensive, and inefficient.
This is indicative of the shortcomings of many current molecular reactions used in biotechnology, such as DNA synthesis or carbon nanotube production, which provide a low reaction yield of the desired product.
In addition, many side reactions occur in macromolecule reactions that yield undesirable products.
Finally, lack of synchronization in multi-molecule polymer reactions (e.g. exonuclease DNA sequencing) results in inaccurate results.
To attempt to overcome their shortcomings, current methods usually require a large excess of reagent, which results in more side reaction and higher cost.
Furthermore, in many cases reactions must be performed in multiple steps and require nucleic acid manipulation.
This results in inefficient methods with relatively low yield and low product purity.

Method used

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  • Microfluidic apparatus, systems, and methods for performing molecular reactions
  • Microfluidic apparatus, systems, and methods for performing molecular reactions
  • Microfluidic apparatus, systems, and methods for performing molecular reactions

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Embodiment Construction

[0013]The invention generally provides improved apparatuses, systems and methods for performing biomolecular reactions in a microfluidic device. In one group of related embodiments, referred to herein as “the nucleic acid capture” embodiments, the disclosed systems, apparatus, and methods provide for the capture of a single nucleic acid molecule in a microfluidic channel upstream from an optical detector. These embodiments allow sequential detection of one or more nucleotides released from a nucleic acid molecule. Accordingly, the disclosed methods, systems and apparatus are of use for the rapid, automated sequencing of at least a portion of a nucleic acid molecule.

[0014]Methods for isolating single nucleic acid molecules on a solid support and manipulation of these molecules with optical tweezers have been developed. However, the lasers used by optical tweezers could potentially affect optical detection methods such as Raman spectroscopy. Furthermore, the integration of optical twe...

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Abstract

Disclosed herein are methods, apparatuses, and systems for performing nucleic acid sequencing reactions and molecular binding reactions in a microfluidic channel. The methods, apparatuses, and systems can include a restriction barrier to restrict movement of a particle to which a nucleic acid is attached. Furthermore, the methods, apparatuses, and systems can include hydrodynamic focusing of a delivery flow. In addition, the methods, apparatuses, and systems can reduce non-specific interaction with a surface of the microfluidic channel by providing a protective flow between the surface and a delivery flow.

Description

BACKGROUND OF THE INVENTION[0001]1. Field of the Invention[0002]The present invention relates generally to devices, systems, and methods for performing molecular reactions, and more specifically to microfluidic devices, systems, and methods for performing molecular reactions.[0003]2. Background Information[0004]Determination of the entire sequence of the human genome has provided a foundation for identifying the genetic basis of diseases such as cancer, cystic fibrosis, sickle cell anemia and muscular dystrophy. However, a great deal of work remains to be done to identify the genetic variations associated with each disease and to develop more sensitive and accurate tests for these diseases. This development would be accelerated greatly if efficiency and product yields of present methods were improved.[0005]Current methods for determining nucleic acid sequence information are laborious, expensive, and inefficient. This is indicative of the shortcomings of many current molecular react...

Claims

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Application Information

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Patent Type & Authority Applications(United States)
IPC IPC(8): C12Q1/68
CPCC12Q1/6827C12Q1/6869G01N21/658Y10T436/11Y10T436/117497Y10T436/143333C12Q2565/629C12Q2521/319C12Q2565/632C12Q2565/619
Inventor SUNDARARAJAN, NARAYANANSUN, LEIZHANG, YUEGANGSU, XINGCHAN, SELENAKOO, TAE-WOONGBERLIN, ANDREW A.
Owner SUNDARARAJAN NARAYANAN
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