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Primers, kits and method for fluorescent quantitative PCR detection of bursaphelenchus xylophilus or bursaphelenchus mucronatus

A pine wood nematode and detection kit technology, which can be used in the determination/inspection of microorganisms, biochemical equipment and methods, DNA/RNA fragments, etc., can solve the problem of unreasonable primer design, inability to accurately detect pine wood nematodes, non- Adult identification and other problems, to achieve a good DNA extraction effect, to meet the rapid identification, accurate and reliable results

Inactive Publication Date: 2021-03-23
沈阳知物检测技术有限公司 +3
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

The current detection method used in the laboratory is simple morphological identification after nematode isolation, but the process of isolating nematodes is relatively long, non-adult worms cannot be identified through morphological identification, and need to be cultivated to adult worms to be identified, and the results of morphological identification are also Rely on the experience of the inspector
At present, there are also cases of detection by ordinary PCR, but the detection method is relatively complicated and time-consuming, coupled with the unreasonable design of primers, the application is not widespread
In addition, CN104673926 discloses a fluorescent quantitative PCR detection technology, which expands the detection technology of pine wood nematode to a certain extent, but there are still problems such as inability to accurately detect pine wood nematode, long detection time, large errors in cotton swab sampling and general sensitivity

Method used

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  • Primers, kits and method for fluorescent quantitative PCR detection of bursaphelenchus xylophilus or bursaphelenchus mucronatus
  • Primers, kits and method for fluorescent quantitative PCR detection of bursaphelenchus xylophilus or bursaphelenchus mucronatus
  • Primers, kits and method for fluorescent quantitative PCR detection of bursaphelenchus xylophilus or bursaphelenchus mucronatus

Examples

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Embodiment 1

[0038] This embodiment provides a fluorescence quantitative PCR detection method of a pine-like nematode, and a kit employed comprises a pine nematode fluorescent quantitative PCR detection primer, probe one and other reagents. Among them, the pine wire nematode fluorescence quantitative PCR detection primers include PCR amplification primers, including PCR amplification primers, including PCR amplification upstream primers, whose nucleotide sequences such as SEQ ID NO: 1 (5'-gttccctgatgatgTTC) -3 '), and PCR amplification downstream primers 1. The nucleotide sequences are shown in SEQ ID NO: 2 (5'-cgggcttttcaatcctcgc-3'). The probe is a TAQMan hydrolyzed probe whose nucleotide sequence is shown in SEQID NO: 3 (5'-Fam-TggaagcgagagaggcgcgcgtgcaacggTG-BHQ-3 '). Other reagents include a DNA extraction reagent, including dodecyl sodium sulfate, pH 8.0 trihydroxymethylmethane hydrochloric acid buffer, ethylenediamine tetracetate, dithiothiol, and The concentration of each component in ...

Embodiment 2

[0116] This embodiment provides a fluorescence quantitative PCR detection method of a proposa nematode, and the kit comprising a pine nematode fluorescence quantitative PCR detecting primers, probes, and other reagents. Among them, the proportional linear fluorescence quantitative PCR detection primer comprises a PCR amplification primer; the PCR amplification primer, including PCR amplification upstream primers, nucleotide sequences such as SEQID NO: 4 (5'-TtctacgcactGTTTGTCCG) -3 '), and PCR amplification downstream primers 2, whose nucleotide sequences are shown in SEQ ID NO: 5 (5'-TtCacgacgaagctcaAcaa-3'). The probe is a TAQMan hydrolyzed probe whose nucleotide sequence is shown in SEQ ID NO: 6 (5'-Fam-cgcatcgTG-BHQ-3 '). Other reagent two include a DNA extraction reagent 2, and the DNA extracting reagent is a DNA extraction reagent one of Example 1. Other reagents also include a positive control one and a negative reference. This detection method includes the following steps:...

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Abstract

The invention discloses primers, kits and a method for fluorescent quantitative PCR detection of bursaphelenchus xylophilus or bursaphelenchus mucronatus, wherein the fluorescent quantitative PCR detection primer for bursaphelenchus xylophilus comprises a PCR amplification primer I; the PCR amplification primer I comprises a PCR amplification forward primer I with the nucleotide sequence shown inSEQ ID NO: 1 (5'-GTTCCGCCTACTGATGGTTC-3') and a PCR amplification reverse primer I with the nucleotide sequence shown in SEQ ID NO: 2 (5'-CGGCTTTTCATCATCCTACGC-3'); the fluorescent quantitative PCR detection primer for bursaphelenchus mucronatus comprises a PCR amplification primer II; and the PCR amplification primer II comprises a PCR amplification forward primer II with the nucleotide sequenceshown as SEQ ID NO: 4 (5'-TTCTCTACGCAGCACGTTTGTCCG-3') and a PCR amplification reserve primer II with the nucleotide sequence shown as SEQ ID NO: 5 (5'-TTCACGAGACAGAGCTCACAACAAA-3'). The invention hasthe advantages of good DNA extraction effect, simple operation, short time consuming (within 1 hour), accurate and reliable results, and at least a single nematode can be detected, with the characteristics of high sensitivity and high specificity.

Description

Technical field [0001] The present invention relates to the field of forestry insect detection, and more particularly to fluorescence quantitative PCR detection primers, kits and methods of pine or pose nematodes. Background technique [0002] Pine material nematode and proposal linearworms are a perforated animal door, a nematode, pad blade, a pulleys, an umbrella, is a pests that endanger pine trees. Pine wood nematode disease is also known as loose sickness, which is spread through the media insects such as Moque Tians. Pine trees in the pine body. Pine trees after the pinem nematode and the pose nematode infection, the coniferous yellowish brown or red brown, wilt, the resin secretion, the trunk can observe the invading hole or spawning of the cow, the ovulation of the ovate, the disease tree is dry, and finally rot. Therefore, nematode detection is an important basis for the prevention and control of forestry. At present, the detection method used in the laboratory is a simp...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6888C12Q1/6851C12N15/11
CPCC12Q1/6851C12Q1/6888C12Q2531/113C12Q2561/101C12Q2563/107
Inventor 于海英姜生伟吴昊张歆逢黄瑞芬关尔鑫王子旭
Owner 沈阳知物检测技术有限公司
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