Application of wfdc21p in the diagnosis and treatment of liver cancer
A technology for WFDC21P and liver cancer, applied in the field of biomedicine, can solve problems such as unclear biological functions
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Embodiment 1
[0069] Example 1 Screening Gene Markers Related to Liver Cancer
[0070] 1. Sample collection
[0071] The cancer tissues and paracancerous tissues of 10 liver cancer patients were collected, and the patients gave informed consent, and all the above specimens were obtained with the consent of the organizational ethics committee.
[0072] 2. Preparation of RNA samples
[0073] Tissue RNA was extracted using QIAGEN tissue RNA extraction kit, and the operation was performed according to the specific steps in the manual.
[0074]3. Reverse transcription and labeling
[0075] The mRNA was reverse-transcribed into cDNA using the Low RNA Input Linear Amplification Kit, and the experimental group and the control group were labeled with Cy3, respectively.
[0076] 4. Hybridization
[0077] The gene chip uses Cannes Bio-Human lncRNA Array, and hybridization is performed according to the steps of the chip instruction manual.
[0078] 5. Data processing
[0079] After hybridization,...
Embodiment 2
[0082] Example 2 QPCR sequencing to verify the differential expression of WFDC21P gene
[0083] 1. Large-sample QPCR verification of WFDC21P gene differential expression. According to the sample collection method in Example 1, 60 samples of liver cancer tissues and 60 samples of paracancerous tissues were collected.
[0084] 2. The RNA extraction steps are the same as in Example 1.
[0085] 3. Reverse transcription:
[0086] Use 25μl reaction system, take 1μg total RNA for each sample as template RNA, and add the following components to PCR tubes: DEPC water, 5× reverse transcription buffer, 10mM dNTP, 0.1mM DTT, 30μM Oligo dT, 200U / μl M-MLV, template RNA. Incubate at 42°C for 1h, then centrifuge briefly at 72°C for 10min.
[0087] (3) QPCR amplification test
[0088] Primer design:
[0089] The primer sequence of WFDC21P gene is:
[0090] Forward primer: 5'-TCTATTGACTGAAGTTGAC-3' (SEQ ID NO.2)
[0091] Reverse primer: 5'-ATTATGTCTCTGGGTCTT-3' (SEQ ID NO.3)
[0092] T...
Embodiment 3
[0103] Example 3 Differential expression of WFDC21P gene in liver cancer cell lines
[0104] 1. Cell culture
[0105] Human liver cancer cell lines HepG2, Huh7 and normal liver cell line HL-7702 were incubated in DMEM containing 10% fetal bovine serum and 1% P / S at 37°C and 5% CO 2 , Cultivated in an incubator with a relative humidity of 90%. Change the medium once every 2-3 days, and use 0.25% EDTA-containing trypsin for routine digestion and passage.
[0106] 2. Extraction of RNA
[0107] 1) Digest the adherent cells with trypsin, and the cells obtained by pipetting are centrifuged, resuspended, washed, and then resuspended in DMEM medium containing 10% FBS;
[0108] 2) Transfer the resuspended cells to a 6-well plate, add medium to 2m1 / well, and shake the 6-well plate to resuspend the cells evenly;
[0109] 3) The cells were adhered to the wall for 48 hours, and the culture medium was removed;
[0110] 4) Lyse the cells with 1ml Trizol reagent, blow and beat the wall o...
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