Primers for identifying pathogenic bacteria of tomato neck-root rot and wilt and kit
A technology of pathogenic bacteria and tomato, applied in the field of molecular biology, can solve problems such as complex operation, low identification accuracy, threat to tomato yield and quality, and achieve the effect of strong primer specificity and high detection accuracy
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[0028] 1. Primer design
[0029] According to the conserved sequence of pgx4 in GenBank (GenBank numbers AB256820.1, AB256830.1, AB256818.1, AB256798.1, AB256796.1, AB256797.1, AB256795.1, GU169176.1, AB256825.1), degenerate design Primer FL-F (5'-GATGGTGGAACGGTATGACYC-3', shown in SEQ ID NO: 5) and FL-R (5'-GATATCCTTRACACCATCACA-3', shown in SEQ ID NO: 6), the amplification length is 960bp, for The fragments were cloned, sequenced and analyzed, and specific primers for the physiological race 1 of Fusarium oxysporum tomato neck rot and root rot specialization and Fusarium oxysporum tomato specialization 1 were designed within the 960bp sequence.
[0030] The specific primer sequences for Fusarium oxysporum tomato neck rot and root rot are as follows:
[0031] ForL-upstream primer: 5'-CCTTACTCGACATTTTTTCAGA-3' (shown in SEQ ID NO: 1);
[0032] ForL-downstream primer: 5'-CATCAAGGCATAGTAAGAT-3' (shown in SEQ ID NO: 2);
[0033] SEQ ID NO: 1 consists of 21 bases, SEQ ID NO: 2 c...
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