DNA library for detection and diagnosis of hereditary cardiomyopathy causing genes and application thereof
A DNA library and pathogenic gene technology, applied in the field of DNA library, can solve the problems of low throughput and inability to meet the timeliness of multi-sample detection in the gene detection area.
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Embodiment 1
[0058] 1. Reagents used in the method:
[0059] Ion AmpliSeq TM LibraryKit2.0, IonPGM TM TemplateOT2200Kitv3, Ion Sequencing200Kitv2, IonXpressBarcodeAdaptors1-16Kit, Ion318 TM ChipKitv2
[0060] 2. Specimen collection and preservation
[0061] (1) Specimen collection: The specimen is the peripheral blood of the patient. Blood is 5ml of venous blood taken routinely, treated with EDTA anticoagulant.
[0062] (2) Storage: It can be detected immediately, stored at 4°C for one week, and stored at -80°C for more than one week.
[0063] 3. Detection steps and result analysis:
[0064] (1) Extraction of genomic DNA of specimens: DNA extraction of specimens was carried out according to the operation instructions of the blood DNA extraction kit of Tiangen Biochemical Technology (Beijing) Co., Ltd.
[0065] (2) Super multiplex PCR amplification and library building of the target detection region: the whole exons of 80 genes involved in the present invention are used as the dete...
Embodiment 2
[0101] In the present invention, the primer pool contains 8 cardiomyopathy pathogenic genes newly discovered by the inventor, as shown in the following table:
[0102] Numbering
gene name
OMIM number
Associated disease
1
CNBP
116955
familial dilated cardiomyopathy
2
COX15
603646
familial dilated cardiomyopathy
3
CTF1
600435
familial dilated cardiomyopathy
4
CTLA4
123890
familial dilated cardiomyopathy
5
FHL2
602633
familial dilated cardiomyopathy
6
FOSL1
136515
familial dilated cardiomyopathy
7
HLA-DQB1
604305
familial dilated cardiomyopathy
8
SEMA4D
601866
familial dilated cardiomyopathy
[0103] The newly discovered 8 cardiomyopathy-causing genes come from the research accumulation and family investigation of the inventors over the years. The inventors first searched through the KEGG signaling pathwa...
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