Recombinant soybean allergen, mutant and preparation methods and application of recombinant soybean allergen and mutant
A soybean allergen and mutant technology, applied in the field of genetic engineering, can solve the problems of consuming a lot of manpower and financial resources, affecting the therapeutic effect and clinical application specifications, complex purification process, etc., and achieving the effect of reducing the binding ability.
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Embodiment 1
[0034] Example 1 Cloning and expression of recombinant soybean allergen
[0035] (1) Determination of the nucleic acid sequence of the recombinant soybean allergen: Obtain the nucleic acid sequence (X60043) of the natural soybean allergen Gly m4 from the NCBI database, and add an affinity tag 6*HIS, STREPII or S protein, and then add Nde I, Eco RI, Xho I, Pst I and other enzyme cutting sites to the N-terminal and C-terminal of the sequence respectively to obtain the target gene fragment Gly m4 of the recombinant soybean allergen.
[0036] (2) According to the codon preference of Escherichia coli, the nucleotide sequence of the target gene Gly m4 was codon-optimized to make the target gene more suitable for expression in the host bacteria. After optimization, the GC content was 35-65%, and the original amino acid sequence was not Change, as shown in SEQ ID NO:1.
[0037] (3) Artificially synthesized optimized Gly m4 gene sequence.
[0038] (4) After double digestion, the ta...
Embodiment 2
[0043] Example 2 Antigen epitope analysis and mutation site determination of recombinant soybean allergen
[0044] (1) Using online software platforms including SYFPEITHI, MHCPred, SYFPEITHI, BIMAS, NetMHCⅡ, MHC-THREAD, EpiPredict, HLA-DR4 binding, ProPred, RankPep, SVMHC, PREDEP, PREDICT, etc. to analyze the antigenic index of amino acid sequences of recombinant soybean allergens for analysis. Based on the analysis of various software, the results showed that the antigenic value of the 54-73, 79-98, 135-157 regions in the amino acid sequence of the recombinant soybean allergen was higher.
[0045] (2) Carry out amino acid substitutions for one or more sites with relatively high antigenic value to weaken the antigenicity. The above-mentioned antigenicity analysis is performed on the amino acid sequence after antigenic modification, and so on, and the mutation sites with significantly reduced antigenicity are screened out.
Embodiment 3
[0046] Example 3 Construction of recombinant soybean allergen mutants
[0047] (1) For the identified mutation site, design mutant primers according to the method provided by the mutation kit. The Tm value is generally required to be greater than 78°C, and the primer length is more suitable between 25-45 bases.
[0048] (2) According to the requirements of the mutation kit, the recombinant expression plasmid of the recombinant soybean allergen was used as a template for mutation PCR.
[0049] (3) After digesting the PCR product with the enzyme provided in the kit, transform the competent cells, pick positive clones, and sequence to check whether the mutation is successful.
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