Enzyme stabilization by cationic surfactants
A technology of surfactants and cations, applied in the direction of enzyme stability, enzymes, transferases, etc., can solve problems such as polymerase stability limitations
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Embodiment 1
[0070] Ability of Taq polymerase to amplify DNA segments with and without detergent
[0071] This example describes a PCR-based assay for determining the stability of detergents (ie, surfactants) to polymerases. The conditions specified therein are: the polymerase cannot produce a detectable amplification product in the absence of detergent, but can produce a detectable amplification product in the presence of a stable detergent such as Tween 20.
[0072] Prepare the following reaction mixture:
[0073] 100 μl of 2 mM dNTP mix
[0074] 2ng / μl pGEM luc 10μl
[0075] Primer A (1μg / μl) 10μl
[0076] Primer B (1μg / μl) 10μl
[0077] 100 μl of 10 X Taq buffer
[0078] 25mM MgCl 2 100μl
[0079] Nanopure water 670μl
[0080] Total 1000μl
[0081] pGEM luc (Part#E1541) and 25mM MgCl were purchased from Promega, Madison WI 2 (Part#E1902). The 10X Taq buffer formulation was: 500 mM KCl, 100 mM Tris-Cl (pH 9.0 at 25°C). 10X Taq buffer was prepared by dissolving KCl and Trizm...
Embodiment 2
[0092] Surfactant Screening
[0093] In this example, the surfactant was screened for its ability to stabilize the enzyme. Dissolve the following compounds in nanopure water to a final concentration of 10% (w / v or v / v, depending on whether the substance is solid or liquid): tetradecyltrimethylammonium bromide (Sigma T4762), sulfo Dioctyl succinate (Sigma D-4422), cholic acid (Sigma C-1254 lot 56H0339), taurocholic acid (Sigma T-4009, lot 15H5001), 3-[(3-cholamidopropyl) di Methylamino]-1-propanesulfonic acid inner salt (Sigma C-3023, Lot 86H5022), 3-[(3-cholamidopropyl)dimethylamino]-2-hydroxy-1-propanesulfonate ( Sigma C-3649, lot 35H5065), cetylpyridinium chloride (Sigma C-9002, lot 77H1047), Tween 20 (SigmaP-1379) and Triton X-100.
[0094] Prepare 10X buffers with each of these surfactant solutions. The 10X buffer composition for each surfactant is: 500mM KCl, 100mM Tris-HCl pH9.0 (at 25°C), 1% surfactant (by adding the above detergent solution at 1 :1...
Embodiment 3
[0109] Screening of other surfactants
[0110] In this example, other surfactants were screened for their ability to stabilize proteins. Prepare a nanopure aqueous solution (10% w / v or v / v) of: N-dodecyl-n,n'-dimethyl-3-ammonium-1-propanesulfonate (Sigma D-4516 , lot 95H5045), Mega 10 (Sigma D-6277, lot 37H5041), N-octadecyl-N,N-dimethyl-3-ammonium-1-propanesulfonate (Sigma O-8004, lot 44H5006 ), SB 3-10, N-tetradecyl-N,N-dimethyl-3-ammonium-1-propanesulfonate (Sigma T-7763, lot 96H5001), dimethyl di-decabromide Octyl ammonium, Triton X-200 (Sigma X200, lot 75H0989), Triton W-30 (Sigma Chem. Co. W-30, lot 18F0766), Triton X-301 (Sigma X301, lot 13H7706), Triton 770 (Sigma 770, lot 18F0768).
[0111] Add 99 μl aliquots of the master reaction mixture described in Example 1 to separate 0.2 ml tubes, then add 1 μl of 10% surfactant solution to each tube and purify in the absence of detergent 2 μl of Taq polymerase (10 U / μl). Control reactions consisted of tubes ...
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