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Method for investigating relationship between lung cancer clinical pathology and gene expression

A technology of gene expression and lung cancer, applied in the field of medical exploration, can solve the problems of no driver changing genes, patients cannot benefit, etc., and achieve the effect of preventing spread

Pending Publication Date: 2019-12-13
XIN HUA HOSPITAL AFFILIATED TO SHANGHAI JIAO TONG UNIV SCHOOL OF MEDICINE
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AI Technical Summary

Problems solved by technology

[0007] Currently, 30%-50% of lung adenocarcinomas in general have no known driver alteration genes, and these patients cannot benefit from targeted therapy

Method used

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Embodiment Construction

[0027] Further detailed explanation through specific implementation mode below:

[0028] In this embodiment, the target gene is ARHGAP24 as an example for illustration.

[0029] A method of investigating the relationship between clinicopathology and gene expression in lung cancer comprising the steps of:

[0030] S1, confirming candidate genes: Using the sequencer Hiseq-3000 of Illumina Company to analyze the differentially expressed gene profiles in 3 cases of lung cancer tissues and 3 cases of normal lung tissues, and using bioinformatics analysis methods to screen candidate genes that may be involved in the occurrence and development of lung cancer;

[0031]S2, select the target gene: establish the regulatory mechanism hypothesis of lung cancer, and select the target gene ARHGAP24 from the candidate genes as the research object;

[0032] S3, establishment of database: sample database, collect 45 cases of surgically resected lung cancer tissues and several specimens; pathol...

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Abstract

The invention belongs to the field of medical exploration methods, and provides a method for investigating the relationship between lung cancer clinical pathology and gene expression; the method is used for guiding personalized and accurate lung cancer treatment and prognosis in the aspect of gene mutation. The method comprises the steps: confirmation of candidate genes; selection of a target gene; establishment of database; verification of lung cancer candidate genes; relevance of the target gene with lung cancer prognosis and clinical pathology characteristics; verification of expression ofthe target gene in lung adenocarcinoma; screening of a target gene low-expression lung cancer cell strain; influence of target gene overexpression / interference on lung cancer cell in-vitro invasion and metastasis; hypothesis of regulation and control of the target gene on the aspects of cell cycle apoptosis and invasion; regulation and control experiments of the target gene on the aspects of cellcycle apoptosis and invasion; and influence of target gene overexpression on a downstream signal path. In combination with various databases, various hypotheses are provided, the correctness of the hypotheses is verified through the experiments, and the next diffusion condition of lung cancer cells and the information interaction condition between cancer cells are predicted.

Description

technical field [0001] The invention belongs to the field of medical exploration methods, in particular to a method for investigating the relationship between clinical pathology and gene expression of lung cancer. Background technique [0002] Lung cancer is the most common malignant tumor in the world. Worldwide, lung cancer occupies the first place in the cause of cancer death in men, and it is also the second most common cause of cancer death in women (after breast cancer). The incidence of lung cancer in my country shows an increasing trend year by year, with an average annual increase of nearly 2%. Lung cancer is divided into multiple tissue types according to different pathological characteristics, and the treatment measures are also different for different lung cancer tissue types. According to the 2004 edition of the WHO classification, common histopathological types of lung cancer are divided into non-small cell carcinoma (NSCLC) and small cell carcinoma (SCLC). N...

Claims

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Application Information

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IPC IPC(8): C12Q1/6886
CPCC12Q1/6886C12Q2600/158C12Q2600/118C12Q2600/156
Inventor 王磊刘娟胡丰庆
Owner XIN HUA HOSPITAL AFFILIATED TO SHANGHAI JIAO TONG UNIV SCHOOL OF MEDICINE
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