Human GPD2 gene inhibitor and application thereof
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Embodiment 1
[0052] Construction of lentiviral vector for suppressing human GPD2 gene
[0053] 1. RNA interference target design and double-stranded DNA oligo preparation
[0054] (1) Screening targets for human GPD2 gene inhibitors
[0055] The GPD2 (NM_000408) gene information was retrieved from Genbank; according to the RNA interference sequence design principle, an effective shRNA interference target for the GPD2 gene was selected, specifically TGTATTAGAGAGTATCAAT (SEQ ID NO: 1).
[0056] (2) DNA oligo sequence synthesis
[0057] Design the shRNA interference sequence based on the selected target sequence, and add appropriate restriction endonuclease sites at both ends to complete the vector construction. In addition, a TTTTT termination signal was added to the 3' end of the positive strand, and a complementary sequence to the termination signal was added to the 5' end of the anti-strand. After the design is completed, send it to Jierui Company to synthesize single-stranded DNA olig...
Embodiment 2
[0108] Real-time fluorescent quantitative RT-PCR method to detect the silencing efficiency of GPD2 gene
[0109] The breast cancer MDA-MB-231 cells in the logarithmic growth phase were trypsinized to make a cell suspension (the number of cells was about 5×10 4 / mL) were seeded in 6-well plates and cultured until the cell confluency reached about 30%. According to the multiplicity of infection (MOI, RKO: 10) value, an appropriate amount of the virus prepared in Example 1 was added, the culture medium was replaced after 24 hours of cultivation, and the cells were collected after the infection time reached 4 days. Total RNA was extracted according to the instruction manual of Invitrogen's Trizol. According to the M-MLV operating manual of Promega Company, the RNA was reverse-transcribed to obtain cDNA (see the table below for the reverse transcription reaction system, react at 42°C for 1 h), and then bathed in a water bath at 70°C for 10 minutes to inactivate the reverse transcr...
Embodiment 3
[0117] Detection of proliferation ability of tumor cells infected with lentivirus by MTT assay
[0118] Breast cancer MDA-MB-231 cells were trypsinized and seeded in a 12-well plate with a cell density of 10-15%. The next day, replace with fresh medium containing 5 μg / ml polybrene. The lentivirus of Example 1 was added to the culture plate according to the multiplicity of infection (MOI, RKO: 10) value, and fresh medium was replaced after 12-24 hours of infection. After 72 hours of infection, the fluorescence was observed under a fluorescence microscope, and the infection efficiency reached 90%.
[0119] Trypsinize the virus-infected cells in the logarithmic growth phase, resuspend the complete medium into a cell suspension; inoculate in a 96-well plate, 100 μL per well; store at 37°C, 5% CO 2 Cultivate in an incubator; add 10 μL of 5 mg / mL MTT 4 hours before the end of the culture; discard the culture solution and add 100 mL of DMSO to terminate the reaction; detect the OD ...
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