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Diversified extraction method of high-throughput sequencing data

A sequencing data, high-throughput technology, applied in the field of biological information data processing, can solve the problem of quality distribution of data extracted without detection mechanism

Inactive Publication Date: 2019-04-05
南京派森诺基因科技有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

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Problems solved by technology

Existing related software does not have a corresponding detection mechanism to display the quality distribution of extracted data

Method used

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  • Diversified extraction method of high-throughput sequencing data

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Embodiment Construction

[0027] The present invention will be further described by the following examples, but these examples should not be used to explain the limitation of the present invention.

[0028] In order to realize the purpose of the present invention, the present invention comprises 4 major steps, parameter setting; Data verification; Sequence extraction; Data statistics and visualization, specifically as figure 1 shown.

[0029] parameter settings

[0030] 1. Input the sequencing model, if there is no input, then perform feature extraction for intelligent judgment;

[0031] 2. Enter the sequencing mode, single or paired;

[0032] 3. Enter the extraction method, choose one according to the amount of data, number of sequences, and ratio as needed, and accept single extraction or multiple extractions at the same time, and multiple extractions need to input specific values;

[0033] 4. Enter whether to verify the parameter, when multiple extractions can be set to verify the distribution of...

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Abstract

The invention discloses a diversified extraction method of high-throughput sequencing data. The diversified extraction method of the high-throughput sequencing data is characterized by comprising thefollowing steps of parameter setting, data verification, sequence extraction, data statistics and visualization. The diversified extraction method of the high-throughput sequencing data has the advantages of wider applicability, diversified input, more efficient extraction and datamation of data results.

Description

technical field [0001] The invention belongs to the field of biological information data processing, and mainly relates to a diversified processing method for high-throughput sequencing data. Background technique [0002] In March 2016, precision medicine was selected as one of the 100 major projects during the 13th Five-Year Plan, and the country strongly supports biomedical research. As a result, gene sequencing in the biological industry has developed rapidly. Coupled with the reduction in sequencing costs and the in-depth research of scientists in the field of genes, genetic data is far away. The speed of Moore's Law is accumulating, and the era of biological big data opened by precision medicine has officially arrived. At the same time, the demand for bioinformatics analysis is increasing, and the requirements for relevant analysis algorithms and software are also increasing. Therefore, it is necessary to continuously upgrade and optimize the existing software and rela...

Claims

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Application Information

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IPC IPC(8): G16B30/00G16B45/00
Inventor 杨帆吴倩华刘港彪孙子奎
Owner 南京派森诺基因科技有限公司
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