MTHFR (methylenetetrahydrofolate reductase) gene fragment as SNP (single-nucleotide polymorphism) molecular marker associated with sow foot-leg bone density
A technology of molecular markers and bone density, which is applied in the determination/inspection of microorganisms, biochemical equipment and methods, etc., can solve the problems of high price, limited application, rare research on livestock bones, etc., and achieve high sensitivity and good specificity
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Embodiment 1
[0024] Example 1: Genotyping Detection
[0025] (1) Using the kit method to extract ear tissue DNA from bone density-related populations
[0026] 1) Cut the ear-like tissues of bone density-related populations (breeds: Large White pig and Landrace pig, provided by Guangxi Yangxiang Co., Ltd.) with ophthalmic scissors until it becomes a paste, add 200ulGA (included in the kit), and shake Mix well; then put it into a 56°C water bath for overnight digestion.
[0027] 2) Add 200ul buffer GB (included with the kit) to the digested tissue sample, mix thoroughly by inversion, and place at 70°C for 10 minutes, the solution should become clear, and centrifuge briefly to remove water droplets on the tube wall.
[0028] 3) Add 200ul of absolute ethanol, shake and mix well for 15 seconds, at this time flocculent precipitation may appear, briefly centrifuge to remove water droplets on the tube wall.
[0029] 4) Add the solution and flocculent precipitate obtained in the previous step int...
Embodiment 2
[0036] Example 2 Application of the Molecular Marker Typing Method of the Present Invention in Correlation Analysis of Pig Limb and Hoof Bone Density Traits (1) Correlation Analysis between Molecular Marker Typing Results and Limb and Hoof BMD Traits
[0037] The experimental pigs used for the correlation detection and analysis of genotype and bone density traits of limbs and hooves come from purebred sow groups bred by Guangxi Yangxiang Co., Ltd., including Large White pigs and Landrace pigs (conventional breeds). The DNA used for genotyping is extracted from the ear samples of purebred Large White and Landrace ("Purebred Large White and Landrace" referred to as "pig" in the text of the manual and tables for short). Using the method based on the single-marker association regression model, using the gender of the individual as a fixed effect, the GWAS analysis was performed using the GenABEL software package in the R statistical environment.
[0038] The specific regression an...
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