Application of circRNA in the preparation of products for diagnosing osteoarthritis
A technology of osteoarthritis and a kit, which is applied in the field of biomedicine, can solve the problems of ineffectiveness, and achieve the effect of rapid and effective early detection
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Embodiment 1
[0027] Example 1 High-throughput sequencing screening of differentially expressed genes
[0028] 1. Sampling
[0029] 19 cases of cartilage tissue samples (average age 64.5 years old, age range 58-75 years old, 2 males, 17 females) were obtained from the osteoarthritis operation in the Department of Orthopedics of Peking Union Medical College Hospital. All samples were confirmed by pathological examination and diagnosed as knee joint Osteoarthritis; normal cartilage tissue comes from the Department of Orthopedics, Peking Union Medical College Hospital, which is the articular cartilage tissue of patients undergoing trauma surgery. The obtained tissues were stored in a -80°C low-temperature refrigerator after serial numbering. All clinical samples used in this study were informed to the patients and approved by the Ethics Committee of our hospital.
[0030] 2. Total RNA extraction from tissue samples
[0031] use Reagent (Invitrogen, Carlsbad, CA, USA) was used to extract t...
Embodiment 2
[0056] Example 2 RT-PCR verification of the expression of hsa_circ_0045714 and hsa_circ_0005567 in cartilage tissue of OA patients
[0057] 1. Materials
[0058] Seventeen osteoarthritis cartilage tissue samples were collected from Peking Union Medical College Hospital for osteoarthritis surgery (average age 66 years), and they were grouped and numbered. All samples were confirmed by pathological examination, and the control group was patients with meniscal injury and cruciate ligament injury who underwent arthroscopic surgery. All sample numbers were stored in a -80°C low-temperature refrigerator.
[0059] 2. Expression situation analysis method
[0060] 2.1 Extract the total RNA from the tissue sample, the same as the extraction method in Example 1.
[0061] 2.2 Synthesis of cDNA by reverse transcription
[0062] use III Reverse Transcriptase (invitrogen, Cat. No. 18080-044) was used for cDNA reverse transcription, and the experimental operation was carried out accordi...
Embodiment 3
[0077] Embodiment 3 osteoarthritis diagnostic kit
[0078] Based on the primer set obtained in Example 2, the kit for diagnosing osteoarthritis according to the present invention was assembled, and the kit included the primer set for specifically amplifying hsa_circ_0045714 and hsa_circ_0005567 as shown in Table 1, specifically:
[0079] 1. The kit includes specific amplification hsa_circ_0045714: SEQ ID NO.3 and SEQ ID NO.4;
[0080] 2. The kit includes specific amplification hsa_circ_0005567: SEQ ID NO.5 and SEQ ID NO.6;
[0081] 3. The kit includes specific amplification hsa_circ_0045714 and hsa_circ_0005567: SEQ ID NO.3, SEQ ID NO.4 and SEQ ID NO.5, SEQ ID NO.6.
[0082] The primer pair for specifically amplifying the housekeeping gene (GAPDH) is shown in SEQ ID NO: 7 and SEQ ID NO: 8; it also includes a SYBR Green polymerase chain reaction system, such as PCR buffer, SYBR Green fluorescent dye, and dNTPs. The composition of described PCR buffer is 25mM KCl, 2.5mM MgCl ...
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