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Bis-hot-start DNA polymerase containing nano-antibody and PCR amplification detection method

A nanobody and detection method technology, applied in the field of DNA polymerase, can solve the problems of high price, complicated preparation process, low stability and sensitivity, etc., and achieve the effect of reducing preparation cost

Inactive Publication Date: 2017-12-22
李桂秋
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0004] Chinese patent application No. CN201510707423.1 discloses a quantitative PCR method containing dye EvaGreen and dual hot-start enzymes. The dual hot-start enzymes in this patent include: HotStarTaq DNA polymerase and Anti Taq DNA polymerase. The Anti Taq DNA polymerase is a common monoclonal antibody. Although the hot-start Taq polymerase blocked by monoclonal antibody has strong specificity, its preparation process is complicated, time-consuming and expensive.
[0005] Generally speaking, the stability and sensitivity of the above-mentioned PCR amplification method are still not high, therefore, it is necessary to provide a new dual hot start DNA polymerase to solve the above problems

Method used

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  • Bis-hot-start DNA polymerase containing nano-antibody and PCR amplification detection method
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  • Bis-hot-start DNA polymerase containing nano-antibody and PCR amplification detection method

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0023] Take 1mL of TB clinical samples with a concentration of 1e+6copies / mL, and use the “nucleic acid extraction or purification reagents” produced by Qijie Bioengineering (Shenzhen) Co., Ltd. for nucleic acid extraction. The obtained TB nucleic acid solution is diluted with water to 1e+5copies / mL, 1e+4copies / mL, 1e+3copies / mL, to obtain different concentrations of TB nucleic acid solution.

[0024] Build PCR reaction system

[0025]

[0026]

[0027] Among them: upstream primer: 5'-CGTGATCCTTTGCCAGACACT-3'

[0028] Downstream primer: 5'-TCGGTCGGGCTACACAGGGTCA-3'

[0029] Probe: 5'-FAM-ATCCGACTGTGGCATACGTGCACGTG-BHQ1-3'.

[0030] Use dual hot-start Taq enzyme, chemically modified hot-start Taq enzyme, and nanobody to block hot-start Taq enzyme, and prepare TBPCR reaction system according to the above formula. Among them, chemically modified hot-start Taq enzyme and nanobody block hot-start Taq enzyme, both Mix according to the concentration ratio of 1:1 to form a dual hot start Taq...

Embodiment 2

[0040] Take 1.2 mL of HIV clinical samples with a concentration of 1e+7IU / mL, and use the "nucleic acid extraction or purification reagent" produced by QIAGEN Bioengineering (Shenzhen) Co., Ltd. to perform automated nucleic acid extraction on the QIAsymphony SP / AS automated instrument platform. The obtained HIV nucleic acid solution is gradually diluted with water to 1e+6IU / mL, 1e+4IU / mL, 100IU / mL, 50IU / mL, 20IU / mL to obtain HIV nucleic acid solutions of different concentrations.

[0041] Construction of RT-PCR reaction system

[0042] Reagent

Final concentration

Buffer solution

2.5×

dATP

0.5mmol / L

dCTP

0.5mmol / L

dGTP

0.5mmol / L

dTTP

0.5mmol / L

Upstream primer

0.5μmol / L

Downstream primer

0.5μmol / L

Probe

0.125μmol / L

Reverse transcriptase

10U / ul

Hot start Taq enzyme

0.5U / ul

[0043] Among them: upstream primer: 5'-ATCAAGCAGCCATGCAAATGCT-3'

[0044] Downstream primer: 5'-TGAAGGGTACTAGTAGTTCCTGCTATGTC-3'

[0045] Probe: 5'Fam-ATGAGGAGGCTGCAGAITGGGA–MGB 3'

[0...

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Abstract

The invention discloses a PCR amplification detection method, which comprises the following steps: 1) constructing a PCR reaction system including: a buffer solution, a dATP solution, a dCTP solution, a dGTP solution and a dTTP solution, an upstream primer, a downstream primer and a probe, that are complementary with a detection sample, and a bis-hot-start DNA polymerase, which is formed by mixing chemical-modified hot-start Taq enzyme and nano-antibody-blocked hot-start Taq enzyme according to concentration ratio of 1:1; 2) blending the PCR reaction system with a detection sample to perform PCR amplification; 3) acquiring circulation threshold value after the PCR amplification, and according to the circulation threshold value, determining the quantity of a to-be-detected substance in the detection sample. In the invention, the nano-antibody is selected for preparing the hot-start Taq enzyme to form the bis-hot-start DNA polymerase, so that the PCR amplification detection method not only can simulate a polymerase monoclonal antibody for application in hot-start PCR, but also can functionally replace the monoclonal antibody, which is poor in stability and is greatly reduced in preparation cost.

Description

【Technical Field】 [0001] The invention belongs to the technical field of DNA polymerases for fluorescence quantitative PCR amplification and detection, and particularly relates to a double hot-start DNA polymerase and a PCR amplification detection method. 【Background technique】 [0002] When DNA polymerase performs PCR reaction, it still has residual enzyme activity during the process from low temperature (20℃~37℃) to high temperature (94℃~95℃), and low-level non-specific annealing and extension are at the beginning and This occurs during thermal cycling, which in turn leads to the formation of non-specific amplification products in subsequent PCR cycles, ultimately reducing the sensitivity and yield of the reaction by reducing the required amplification signal or the signal is masked by high background values. Hot-start PCR is to start the PCR enzymatic reaction after the initial denaturation stage. The hot-start reduces the formation of primer dimers, primer mismatches and non-...

Claims

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Application Information

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IPC IPC(8): C12N9/12C12N9/96C12Q1/68
CPCC12N9/12C12N9/96C12Q1/6851C12Y207/07007C12Q2531/113C12Q2521/101C12Q2527/149
Inventor 李桂秋黄翠华另进华
Owner 李桂秋
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