Noninvasive detection method for screening healthily grown blastulas
A detection method, blastocyst technology, applied in the field of epigenetic informatics, can solve problems such as poor accuracy, achieve the effect of improving accuracy and pregnancy success rate
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Embodiment 1
[0060] Example 1 Discovery of DNA methylation instability at the genome-wide level in human blastocysts
[0061] The present invention collects blastocysts with the highest grade AA grade and inferior grades CC, BC or CB graded by the Gardner Morphological Blastocyst Grading System. These blastocysts come from the third hospital of Peking University and affiliated to Guangzhou Medical University In the Third Hospital, when a patient is undergoing assisted reproductive surgery, several blastocysts will be cultured in vitro at the same time, and then the one with the best shape will be selected for transplantation. The remaining blastocysts will be donated to the scientific research of this project after signing the informed consent of the patient. Research. For each blastocyst, genome-wide methylation sequencing at single-base resolution was performed. The "one-tube" experimental method of the present invention is as follows:
[0062] 1. Sample preparation
[0063] After the...
Embodiment 2
[0105] Example 2 Incorrect methylation reprogramming affects signaling pathways regulating early embryonic development
[0106] Gene function analysis (gene ontology) was performed on regions with different methylation states in high-grade embryos and low-grade embryos.
[0107] The analysis results found that the differentially methylated regions (DMRs) located in gene promoters are mainly enriched in many pathways related to embryonic development, such as cell cycle, DNA metabolism, DNA modification, chromosome positioning, RNA editing, DNA repair, cell cycle, etc. ( Figure 5 ). These genes whose differentially methylated regions are located inside genes are mainly enriched in the development of specific tissues, such as neural development, neuron differentiation and fate determination, spinal cord structure, mRNA homeostasis, etc. ( Figure 5 ).
[0108] The results also showed that methylation of enhancer regions in the lowest grade CC embryos tended to be erroneously ...
Embodiment 3
[0109] Example 3 The relationship between the methylation level of pre-implantation blastocyst and the birth rate of infants after ART
[0110] In this example, the average methylation level of grade AA blastocysts is 0.3±0.02 as the measurement standard, which is the quantitative standard for non-invasive detection of clinical pre-implantation blastocysts. This standard is based on the morphological detection, and it is a brand-new clinical index for further accurate screening of normally developing blastocysts.
[0111] In order to further verify the accuracy of the index, the present invention has collected 6 blastocysts of B* grade ( figure 2 ), the results showed that the methylation levels of 3 samples in B* grade samples significantly deviated from the standard of 0.3, the average methylation level of AA grade blastocysts. exist figure 1 It shows that 1 of the 5 samples of grade AA deviates from the standard, and 6 of the 7 grade C* embryos tested deviate from the st...
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