Construction method for distinguishing model of activity effect of PBDEs derivatives on enoyl-ACP reductase
A construction method and reductase technology, applied in the field of organic pollutant identification
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[0020]In order to make the above objectives, features, and advantages of the present invention more obvious and understandable, the specific embodiments of the present invention will be described in detail below in conjunction with specific embodiments.
[0021]Prediction method of PBDE derivative on enoyl-ACP reductase inhibitory activity:
[0022](1) Receptor and ligand modeling: The protein molecular structure of enoyl-ACP reductase (PDB ID: 1C14, FaBI) comes from the RCSB protein database (http: / / www.rcsb.org / pdb); in progress Before docking, delete the B chain of enoyl-ACP reductase and the NAD+ (nicotinamide adenine dinucleotide) bound in the B chain, delete all water molecules in the receptor, and use the NAD+ bound A chain as the next molecule Docking the used receptor, and adding NAD+ and TCS (Triclosan, Triclosan) to the hydrogen atom; all small ligand molecules (ie PBDEs derivatives and positive control TCS) use sybyl7.3 (Tripos Inc., St. The Sketch Molecule module in Louis, MO...
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