A method for automatic wiring of functional elements in protein two-dimensional structure graph

Abstract

The invention provides an automatic wiring method of a protein two-dimensional structure diagram function element. The method comprises the following steps: obtaining and storing the length of protein and protein function element data in a protein structure diagram, judging whether function element file data are empty, and if not, reading the function element file data; judging whether the names of adjacent function elements are overlapped according to the difference of positions of two adjacent function elements and the minimum difference of relative distances between two function element file names, if so, determining final positions of abscissas of the function element file names again according to the positions of function elements in function element files and the minimum difference of relative distances between two function element file names, and otherwise, determining the positions of the function elements in the function element files as the final positions of the abscissas of the function element file names; and determining the position of a callout line according to the positions of the function elements in the function element files and the final positions of the abscissas of the function element file names. By adoption of the automatic wiring method provided by the invention, the protein two-dimensional structure diagram is drawn quickly and accurately.

Description

technical field [0001] The embodiment of the method relates to the technical field of protein structure diagram wiring, in particular to an automatic wiring method for functional elements of a protein two-dimensional structure diagram. Background technique [0002] In the field of bioinformatics technology, scientific articles in the field of molecular and cell biology, there will often be schematic diagrams of some protein domains. Biological experimenters can use Microsoft's PowerPoint charts, Photoshop image processing software or other graphics software to draw protein structures. area. Internationally, drawing software named DOG and plotprotein have been used to draw protein domain diagrams. [0003] However, the disadvantage of using PowerPoint diagrams, Photoshop image processing software is that the position of protein domains is often roughly determined by the eye. Therefore, we can hardly draw protein structure diagrams using the exact scale of protein domains. ...

AI Technical Summary

Problems solved by technology

[0003] However, the disadvantage of using PowerPoint diagrams, Photoshop image processing software is that the position of protein domains is often roughly determined by the eye

Therefore, we can hardly use the exact scale of protein domains to draw protein structure diagrams

The disadvantage of drawing software using DOG and plotprotein is that the distance of some specific patterns in the protein two-dimensional structure diagram is too dense or even overlapped, and can only be roughly marked, and it needs to be added manually

The original information of each function cannot accurately and quickly display the position of the mark

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